Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0355 ATGCTAGAAGGCAAGGCAGTCATTGGTGAGACTGATATGCTACAAACCATGCAGCAAGATGCTCTAGACTTGGCAGCAAAGGCCCTCGACTTCTTTGATGTCACTGAGGCCACCGAGATTGCACGTTTCATTAAAAAGGAATTTGATAGGACGCATGGACCTGGGTGGCAGTGCATTGTTGGAACGGATTTTGGATCATTTGTCACACATTGCTATGGCTGTTTCATCTACTTTCGCATTGCCAGCCTTGCAATTTTGCTCTTCAAGGGGTCTGCTGGTCCAGAGGCTCAGGCAAACCAGATTCCAGTGTTGGAGTCAGTGAAAGCATGA 330 0.4758 MLEGKAVIGETDMLQTMQQDALDLAAKALDFFDVTEATEIARFIKKEFDRTHGPGWQCIVGTDFGSFVTHCYGCFIYFRIASLAILLFKGSAGPEAQANQIPVLESVKA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0355 109 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Vvi19g0355 109 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
Vvi19g0355 109 CDD DLC-like_DYNLL1_DYNLL2 5 89 - -
Vvi19g0355 109 FunFam Dynein light chain 1 90 - -
Vvi19g0355 109 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
Vvi19g0355 109 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
Vvi19g0355 109 PANTHER DYNEIN LIGHT CHAIN 5 89 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0355 Vvi-Chr19 3837685 3838117 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0355 K10418 - vvi:100262405 208.764