Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0343 ATGGCTATACTCTCAACGGACTCAACGAACTGGGGGTTGTCCCTGAAAGTGTTGCTCATATCTACTGGGGTGGTGTCCATGGCTGTGGCATTGAAAATCTCCGTCCCGGTGGTGGTGGAGTTTGCAGTCTCGGAAGTTCCTTCTATTTGGAGCTTTGTTCTGTCCTGGTTGAGACCTCCGTATCTCTACCTTGTCATCAACTTTATCATCATCATCATCGTCGCGTCCTCGAAGCTTCAGCACAAGGTCGAGGAGCCGCCGGAGACAGCCGAGATTACGATTTCCAGCGCTGTGGCAATGGACTACGCGGTTCCGTACAACGGGGTCGTTTCGAAGAATGTAGTGGAGCTGCGGCCGGAGTTCGGATATGTTTATGACGCGAATGCGGTGGTGGAAGCTAGGGCTCCAGATGCCAAGACGGAGATGAAAGGTTTGGAGATGAACGATAGTGATGAGTTCACCATCTCGAGGTCTTCGTGGACACCGGAGAGGAAAGATTCTATGGAAAACATGATTCCTGCTGAGAAACCGCTTGTTTCTATGAGATTCGGTCACCGGAGAGCCGTCAAATCCAGTCCTGAAGCTGGGAAGGTACTGGGAGTATCCAAGCCGAAACGGCACGATACGTTAGAGAGCACGTGGAAGACGATAACGGACGGGCGTCCGATGCCATTAACGAGGCACCTGAAGAAAGCTGACTCGCTGGAATCACAGCGCTGCAGCATCGATCTGACGCCGCAGAAGGTGAAGAAATCAGAGACGTTCACCGACCGGAGTAGCACGAACTCGTCGGTGGCGTCGTCGCCGGGATCGGGGAAGATGAAGAGAGAGCCGTCGCTGAGTCAGGACGAGCTGAACAGGCGAGTTGAAGCGTTCATTAAGAAGTTCAACGAGGAGATGAGGTTGCAGAGGCAGGAATCCTTGAATCAGTACAATGAGATGATCCGCCGTGGGGCACGGTAG 963 0.5317 MAILSTDSTNWGLSLKVLLISTGVVSMAVALKISVPVVVEFAVSEVPSIWSFVLSWLRPPYLYLVINFIIIIIVASSKLQHKVEEPPETAEITISSAVAMDYAVPYNGVVSKNVVELRPEFGYVYDANAVVEARAPDAKTEMKGLEMNDSDEFTISRSSWTPERKDSMENMIPAEKPLVSMRFGHRRAVKSSPEAGKVLGVSKPKRHDTLESTWKTITDGRPMPLTRHLKKADSLESQRCSIDLTPQKVKKSETFTDRSSTNSSVASSPGSGKMKREPSLSQDELNRRVEAFIKKFNEEMRLQRQESLNQYNEMIRRGAR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0343 320 PANTHER COTTON FIBER (DUF761) 17 318 - -
Vvi19g0343 320 Coils Coil 297 317 - -
Vvi19g0343 320 MobiDBLite consensus disorder prediction 245 283 - -
Vvi19g0343 320 Pfam Domain of unknown function (DUF4408) 47 79 IPR025520 -
Vvi19g0343 320 Pfam Cotton fibre expressed protein 282 317 IPR008480 -
Vvi19g0343 320 MobiDBLite consensus disorder prediction 256 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0343 Vvi-Chr19 3653823 3655253 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0343 - - vvi:100267532 598.971