Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0328 ATGGGCTTAAATCGTCCAAATTTAGCCATGGATAATGCCATGTACTCAGAGGAATTGGCTGTTGCCGTTAGAGTTGTCCATATGGCGTGTTGTTTGTGCCAGAGAGTGCAGGATGGGTTGGTTGGGACGAGCAGTGAGCAGGTGAAGTCCAAGGATGATGATTCACCTGTTACAGTTGCAGATTGGAGTGTGCAAGCAACTGTTAGCTGGATATTGGCGGAAGTGTTTGGAAGTCAAAATGTGTCCATTGTTGCAGAAGAAGAGATCCAAACTCTTTCCAAACCTGATTCAGCCGATTTATTGGAAGCGGTGGTGAACACAGTTAATGAATGCTTATCTGAAGCACCTAAGTTTGGTCTCAAATGCCCAGATAAAGCCCTCAGGACATCACAAGTTCTTGATGCCATCAGCCGATGCAACTCAACTGGAGGGCCCAAGGGAAGGCATTGGATACTTGACCCTGTTGATGGAACATTAGGGTTTGTACGAGGGGATCAGTATGCTGTAGCTCTAGCCTTGATTGAGGATGGAAAGGTTGTCATTGGAGTTCTTGGTTGCCCTAATTACCCAATGAACAAGGAATGGCTAAATTACCACAATAAATTCTACCAAGCTATGTCAAAACAGTCCCCACCCGCTTCTGATTCATGGGAGAAGGGATGTGTTATGTATGCAAGGAGAGGAAGTGGTGAAGCATGGATGCAGCCAATGGTCCTGGGAGATCAGAAGCTTGAGTGGCCAAACTCTGCAAGATTGATTAAAGTTTCTTCCATTGACAATCCAGCAATGGCTACTTTTTGTGAACCGGTGGAGAAGGCAAATTCAAACCACTCCTTCACAAAGGGACTTGTTCACAGTGTTGGGCTTAGAAAGCAGCCTTTGCGCGTCTATAGCATGGTGAAGTATGCAGCCATAGCCCGGGGAGATGCTGAGATTTTTATGAAGTTTGCAAGAGCTGGATACAAGGAGAAGATATGGGATCATGCTGCTGGTGTCCTCATTGTAGAAGAGGCTGGTGGTGTGGTAACTGATGCTGGAGGGCGTCCACTGGACTTCTCGAGGGGAATATACCTAGAAGGTCTTGATCGGGGCATCATTGTTTGCTCTGGTGCTGCACTGCATGAGAAAATCATTGGTGCTGTTTATGCTAGCTGGGACTCTTCCAATCTTTGA 1173 0.4646 MGLNRPNLAMDNAMYSEELAVAVRVVHMACCLCQRVQDGLVGTSSEQVKSKDDDSPVTVADWSVQATVSWILAEVFGSQNVSIVAEEEIQTLSKPDSADLLEAVVNTVNECLSEAPKFGLKCPDKALRTSQVLDAISRCNSTGGPKGRHWILDPVDGTLGFVRGDQYAVALALIEDGKVVIGVLGCPNYPMNKEWLNYHNKFYQAMSKQSPPASDSWEKGCVMYARRGSGEAWMQPMVLGDQKLEWPNSARLIKVSSIDNPAMATFCEPVEKANSNHSFTKGLVHSVGLRKQPLRVYSMVKYAAIARGDAEIFMKFARAGYKEKIWDHAAGVLIVEEAGGVVTDAGGRPLDFSRGIYLEGLDRGIIVCSGAALHEKIIGAVYASWDSSNL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0328 390 Gene3D - 254 384 - -
Vvi19g0328 390 PANTHER PHOSPHATASE 9 388 - -
Vvi19g0328 390 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 15 389 IPR006239 GO:0006790|GO:0008441
Vvi19g0328 390 CDD PAP_phosphatase 18 383 - -
Vvi19g0328 390 ProSitePatterns Inositol monophosphatase family signature 1. 150 163 IPR020583 -
Vvi19g0328 390 Pfam Inositol monophosphatase family 53 385 IPR000760 -
Vvi19g0328 390 FunFam PAP-specific phosphatase HAL2-like 254 387 - -
Vvi19g0328 390 SUPERFAMILY Carbohydrate phosphatase 15 383 - -
Vvi19g0328 390 FunFam PAP-specific phosphatase HAL2-like 13 243 - -
Vvi19g0328 390 ProSitePatterns Inositol monophosphatase family signature 2. 326 340 IPR020550 GO:0046854
Vvi19g0328 390 Gene3D - 13 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0328 Vvi-Chr19 3531547 3536402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0328 K01082 - vvi:100264076 791.571