Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0322 ATGGCGTTTGTGACTCAGCGGTTCCTCCCAATCACCAAACCATTCACAGAACCCAAATCCAAACCCAGACCCACCATTTTTCTCCCAAAGGGTCTCCCCCAAACATCTGGAATTTTCTCTGGTACCAACCGGAAAAGATGGGTCGTTGCAGTGGCAGAAGAGCTCGATGTGATCCCAGTTCAGAGCAGCGACTCCACGGATCAGCAAGATGGGGTTTTGGCGAGAATTGAGGTGGAAGAAGAGGGGGAACTGGTGAACCAGGTGGGTGGGTTCTCTGGTGAAGGGAGGTTTTCGTTTGAGGGAGCTGGGGAGTTTCAGGGCTTTTCTTCTTCGTCTTCTTCTTCGACGAGTTCGGAGGGACAGGGTGAGGCTGAGGATGTTGAGAGGTTGATTGATAGAAGTATCAATGCAACGATTGTGCTAGCTGCTGGGAGTTTTGCCGTCACCAAATTGCTTACCATCGATGCTGATTACTGGCATGGATGGACGATTTTTGAGATCCTAAGGTATGCACCCCAACACAACTGGAGTGCTTATGAAGAAGCTCTTAAGACAAACCCAGTTTTTGCCAAAATGGTTATAAGTGGAGTGGTCTACTCTTTAGGGGATTGGATTGCACAGTGCTATGAAGGAAAACCTCTTTTTGAGTTTGACCGTGCTCGGATGTTGAGATCAGGCCTTGTCGGTTTCACCCTACATGGATCACTTTCCCATTATTATTACCAGTTTTGCGAGGCACTTTTCCCTTTCCAAGACTGGTGGGTTGTTCCTGCTAAAGTAGCCTTTGACCAAACTCTATGGGCTGCTGTTTGGAATAGCATTTATTATACAGTTGTGGGATTTTTGCGTTTTGATTCCCCAGCCAATGTTTTTGGTGAATTGAGGGCAACATTCTGGCCCATGCTGACTGCCGGATGGAAACTTTGGCCATTTGCTCACCTTATTACATATGGCGTGATCCCAGTAGAACAAAGGCTCCTGTGGGTGGACTGTGTAGAGCTCATTTGGGTGACAATCCTTTCAACTTACTCAAATGAGAAATCAGAAGCAAGAGTATCTGAAGCATCAGCAGAAGCAGCTTCTAATTCTCCACCAACAGGTTCTCCTGAGTAA 1113 0.4708 MAFVTQRFLPITKPFTEPKSKPRPTIFLPKGLPQTSGIFSGTNRKRWVVAVAEELDVIPVQSSDSTDQQDGVLARIEVEEEGELVNQVGGFSGEGRFSFEGAGEFQGFSSSSSSSTSSEGQGEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYYYQFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAASNSPPTGSPE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0322 370 MobiDBLite consensus disorder prediction 105 121 - -
Vvi19g0322 370 MobiDBLite consensus disorder prediction 105 126 - -
Vvi19g0322 370 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 175 342 IPR007248 GO:0016020
Vvi19g0322 370 Pfam Mpv17 / PMP22 family 280 341 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0322 Vvi-Chr19 3436543 3440920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0322 179 353 Miscellaneous Gene Families AT2G14860 25.143 1.52e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0322 K13348 - vvi:100253839 692.575