Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0314 ATGAAAGTGACTGTCACTCAAATCTTCTTGCTTCTCCTACTTTCCCTTGTTCATTCATTTGCTGAGCAAAGGTCCAGTGAAGAAGAAGAAGTTGAAAGATCTCAGTTCCCATCTGGGTTTCTCTTTGGAGCAGCCACTTCATCATACCAGATTGAAGGAGCAGTTCTTGAAGATGGAAAGAGTCCCAACAACTGGGATGTCTTCTGTCATATTCCAGGAGGCATAAAAAATGGAGATACTGGAGACATTGCAGACGATCATTACCATCAATTCTTGGAGGACATTGAGATAATACATTCATTAGGAGTAAATGCATACAGGTTTTCAATTTCCTGGTCCAGGGTTCTGCCTAGAGGAAGGCTTGGCGAAGTTAATCCAAAAGGTGTGATGTTCTACAGCAAAATTATAGACAATCTCCTGCTAAAGGGTATTGAGCCATATGTGACAATATACCATCATGATCACCCGCAAGAGCTTGAGGAAAGATTCGGGGCTTGGCTAAGTCCTCTTATGCAGGAAGAGTTTGTCCATTTTGCTGAAACATGTTTTGAGAATTTCGGAGATAGAGTGAAGTACTGGACAACAATAAACGAGCCAAACCTATTAGCAGAAATGGCCTATTTGTGGGGGAGATACCCACCAGCACATTGTTCAGCCCCTTTTGGCAATTGCAGCAGCGGCAACTCTGATACAGAGCCTCTCTTTGTGTTGCACAACATGTTACTCTCCCATGCCAAGGCTGCTAACATCTACCGCCATAAATATCAGTTAAAGCAAGGTGGGTTTATTGGGATCATTGCAAATACATTAATGTGTGAACCATTGAGGGATATCGAGCTTGACCGTGAAGCTGCAAAGAGGGCGTTGGCATTTTATATAGCCTGGATGTTAGATCCCCTGGTGTTTGGAGATTACCCTCCTGAAATGCGCCAATATCATGGGAATGAGCTACCAAGGTTTACTTCAGAGGAAACAAAGTTGTTAACACAAAGTCTGGACTTCATCGGCATTAACCATTACACAACTCTGTATGCCAAGGACTGCATCCATTCTACTTGCAGCTCCGATGGAGACCGGGCAATTCAAGGCTTTGTGTATCTTACAGGAGAGCGACATGGTGTGCCAATTGGTGAACGTACGGGGATGAGGAGATTCTTTATAGTTCCCAGAGGGATGGAAAAGATCATCGAGTATGTTAAAGAAAGATACAACAACATGCCCATGTTTGTGACTGAAAATGGATATTCTCCACCAGAGAAAGAAGATGAACAAGAAGAAGACTTGGTACAAGATGCCAAGCGAATTGAGTTCCATAAAGCCTACCTTGCTGCTTTGGCCCGGGCTATAAGGAATGGTGCTGATGTCCGAGGCTATTTTATATGGAGCTTGATGGACAACTTCGAGTGGGTGTATGGTTACAACACCAGATTCGGACTTTACTATGTGGATCGTCAGACTCTTAGGCGAACTCCCAAGCTTTCTGCAAGATGGTATGCAAATTTTTTAACCAACAGTGGCCACAACCATGTAGAGGATGCTAATCCAGGCTCATTCAAAATCAAAGATGCATACTTTCTAGACTGA 1584 0.4337 MKVTVTQIFLLLLLSLVHSFAEQRSSEEEEVERSQFPSGFLFGAATSSYQIEGAVLEDGKSPNNWDVFCHIPGGIKNGDTGDIADDHYHQFLEDIEIIHSLGVNAYRFSISWSRVLPRGRLGEVNPKGVMFYSKIIDNLLLKGIEPYVTIYHHDHPQELEERFGAWLSPLMQEEFVHFAETCFENFGDRVKYWTTINEPNLLAEMAYLWGRYPPAHCSAPFGNCSSGNSDTEPLFVLHNMLLSHAKAANIYRHKYQLKQGGFIGIIANTLMCEPLRDIELDREAAKRALAFYIAWMLDPLVFGDYPPEMRQYHGNELPRFTSEETKLLTQSLDFIGINHYTTLYAKDCIHSTCSSDGDRAIQGFVYLTGERHGVPIGERTGMRRFFIVPRGMEKIIEYVKERYNNMPMFVTENGYSPPEKEDEQEEDLVQDAKRIEFHKAYLAALARAIRNGADVRGYFIWSLMDNFEWVYGYNTRFGLYYVDRQTLRRTPKLSARWYANFLTNSGHNHVEDANPGSFKIKDAYFLD* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0314 527 FunFam Beta-glucosidase 12 21 504 - -
Vvi19g0314 527 SUPERFAMILY (Trans)glycosidases 31 502 IPR017853 -
Vvi19g0314 527 PANTHER GLYCOSYL HYDROLASE 35 508 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 Gene3D Glycosidases 15 512 - -
Vvi19g0314 527 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 40 54 IPR033132 -
Vvi19g0314 527 Pfam Glycosyl hydrolase family 1 34 505 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 PRINTS Glycosyl hydrolase family 1 signature 476 488 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 PRINTS Glycosyl hydrolase family 1 signature 431 442 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 PRINTS Glycosyl hydrolase family 1 signature 452 469 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 PRINTS Glycosyl hydrolase family 1 signature 408 416 IPR001360 GO:0004553|GO:0005975
Vvi19g0314 527 PRINTS Glycosyl hydrolase family 1 signature 331 345 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0314 Vvi-Chr19 3368467 3375227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0314 10 502 Glycoside Hydrolase AT4G21760 50.605 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0314 K05350 - vvi:100267558 1083.55