Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0312 ATGGCCATTAAGACTTCCATCTGCATTGCAGCGGTCCTTGTCATTGATCTCCTTCTAGTTCTCCCCGTGCCCGCCAAGCGCATCGCTCTCCTTAGGTCAAATGATGACCCTGAAGATAGTATGGTGATGAAACTCAATTCCATTAACGGGGAGATGGCCAGAAAAATGAGGCTGCTGATGAGGAGGGCTGATACGCTTGAAGACGCAGGCTCAAGCTTGCCTGATTGCTCTCATGCTTGTGGGTCGTGCTCTCCTTGCCGATTAGTCATGGTCAGCTTTGTCTGCGCCTCGTTGGCTGAAGCGGAGACATGCCCTATATCCTATAAATGTATGTGTAATAGCAAGTCCTATCCTGTTCCATGA 363 0.4959 MAIKTSICIAAVLVIDLLLVLPVPAKRIALLRSNDDPEDSMVMKLNSINGEMARKMRLLMRRADTLEDAGSSLPDCSHACGSCSPCRLVMVSFVCASLAEAETCPISYKCMCNSKSYPVP* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0312 120 Pfam Epidermal patterning factor proteins 69 118 - -
Vvi19g0312 120 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 49 116 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0312 Vvi-Chr19 3355525 3356067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0312 K20729 - vvi:100265926 219.55