Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0304 ATGCATTGGATGCGGCGGAGAGGCTGCCCTGTAGCACTTCTCTCCATCGACTGCTTCAATGCTGGTTCTTTACCTCATGAGGACAATGTGATATTCGTTGTTTCCACCACAGGCCAAGGGGATACACCAGATTCCATGAAGGCATTTTGGAAGTTTCTTTTGCAGAGAAATCTTAATCAGTGGTGGCTAGAAGGAGTTCATTATGCTGTGTTTGGGTTGGGTGATTCTGGTTACCAGAAATATAATGGATTGCAGTTTGTGGCAGAGAAGCTTGACAAAAGACTTTTAGATCTTGGAGCAGTGGCTATTGTTGAAAGAGGTCTGGGCGATGATCAGCACCCTTCAGGGTTCATCCTGGAGAGATGGAGAATTACCTTCCCAATGCTAATAAAAATGCTTCAAAGATCCCCATCAAATTAA 420 0.4429 MHWMRRRGCPVALLSIDCFNAGSLPHEDNVIFVVSTTGQGDTPDSMKAFWKFLLQRNLNQWWLEGVHYAVFGLGDSGYQKYNGLQFVAEKLDKRLLDLGAVAIVERGLGDDQHPSGFILERWRITFPMLIKMLQRSPSN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0304 139 PRINTS Flavodoxin signature 65 75 IPR001094 GO:0010181
Vvi19g0304 139 PRINTS Flavodoxin signature 31 42 IPR001094 GO:0010181
Vvi19g0304 139 PRINTS Flavodoxin signature 92 111 IPR001094 GO:0010181
Vvi19g0304 139 Gene3D - 2 134 IPR029039 -
Vvi19g0304 139 PANTHER NITRIC OXIDE SYNTHASE-RELATED 7 115 - -
Vvi19g0304 139 Pfam Flavodoxin 8 114 IPR008254 GO:0010181
Vvi19g0304 139 FunFam NADPH-dependent diflavin oxidoreductase 1 1 139 - -
Vvi19g0304 139 ProSiteProfiles Flavodoxin-like domain profile. 1 127 IPR008254 GO:0010181
Vvi19g0304 139 SUPERFAMILY Flavoproteins 4 123 IPR029039 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0304 - - vri:117930238 211.075