Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0289 ATGAGGGGTCCTTTGGGGGCAGTGATTGGGAGGTACCCATCAAGTGATGGAAGTACACAAATGGGAGGAATCATAAGGCACAACAGGAAATGCAGGGACATTGCTTTTCTTGTTCTGTTCATTGCCTTCTGGGTTGCTATGATTGTTAACTCCAGCTTTGGATTCAACAAGGGAAACCCTTTGAGGCTAACTTTTGGGTTGGACTACGAAGGAAATGTTTGTGGTAACCGGCATGCAAAACGAAACCTTCGGGAATTAGAACTCAGATACTGGGTTAATCCTAATCAAGTTTACCAAAGTGGTTTGAAGAACAGCGGATTCAAGCTGTCCAATGCCCGGAGCATCTGCTTGATGGAATGCCCTATCCCCTCGGAAGATTCACTAAATTGGGTCTGTGATTATCCAGAGGGAGATATCCATCTAACAATGGATGACTGGATTGACAGGAATTATGATTATTTTGAGTTCCTTACTCCAGATATGAGAAACACCTCTCTTCAACTTCAAGGCCCTTGTTACCCTGTCATATTTCCCAGTGTTAATGTTTTCTGGAGCTGCCAATTTATTGCTCGTGCATCAAATATGTCTTTGCGGCACTGGCAGCAGATGGGTGGAGTGAAAATCAATGAGGACATTGTAATAGACAAATCCATTCATCGGTCTATCAATTCTCGGTCATCTGTCTTAAAGAGATACATGGCTGACATTGCAAAGTCATGGCCAGTATTGATTGTTTGTGGAGGAATCTTGCCACTGTTTTTATCGGTGATTTGGTTGTTGATGATTCGGCATTTTGTTTCTGGAATGCCATGGATAACAGTTATTCTCTTCAATGTTCTCATAGTATCAGTCACAATGTTTTACTACTTAAAAGCTGGATGGATTGGGGATGATGCCATCTCCCCCATCATTGGTGAACATGACCCATATTACAGCGTATTTGGAAGGGAGCTAACTCATCTTCGTGTGGCTGCTGTTATTATGACCGTTGTAATGATTACTTCTGTCCTCTCATCTATTGCAATTGTCCGACGTATCCTTATGGCAACATCTGTCCTGAAGGTTGCTGCGAAGGTTATAGGAGAAGTTCAGGCACTCATAATTTTCCCAATTATGCCATATCTTATTCTTGCAATCTTTTACATAAACTGGCTTTCAGCAGCTCTCTATCTGTTCAGTTCTGGTGAGATCCTCCAGAATGACTGCAACTCCAACTGCTGTGCTTATGATCTTGCATCAAAACGGGTGAACTGTGATCGCTGCTGTGGTTATAGTATCCATTACACACCACATATTGCCATCGCTATCCTCTTCCACCTGTTTGGGTGTTACTGGGTTACCCAATTTTTTATAGCATGCTCCTCGACTGTCATTGCGGGTTCTGTTGCTTCCTATTATTGGGCTCGTGGTGAAACATCTCCAGAGATTCCGTTTCTTCCAGTTTTTTCCTCCATGAAGCGGTTGATGCGTTATAGCCTTGGGTCTGTGGCCCTTGGCTCCCTGACTGTATCATTTGTTGAATCAATCCGCTTTATGCTTGAATCGATTCGTCGCAAATTGAAAGTTTATAATATGATGCCTGAAAGCCGGGTCGGAAGGGTGGCATTTTATTTTTCTCAGGGTTTCCGGAAATGTATCGAATGGACCATCAAATCAGTGAACCGCAATGCATATATAATGATTGCTATAACAGGTAAAAGTTTTTGTAGAGCTTCTGCCATTGCAACAGAATTGATCATCAGTAATATCCTTCGAATAGGGAAGGTCAATGTGATTGGAGATGTTATTCTCTTTCTTGGGAAGTTGTGTGTCAGCCTTTCAAGTGCTGTTTTTGCCTTCCTCATGTTGGATACTCACAAATACAGATCTGCACATAACAAAATCTCCTCCCCATTGTTCCCTGTGCTGGTATGCTGGGGGCTTGGCTATGTTGTTGCCACTCTATTCTTTGGAGTGGTGGAGATGTCAATTGATACCATCATCCTTTCATTCTGCCAGGATTCTGAAGAGCACCAAGGAACAGCCCAATATGCTCCTCCCCTTCTCATTGAGACGCTCAATGACCAAAACGAGATGCAGAGACTTACCCAATGA 2094 0.4293 MRGPLGAVIGRYPSSDGSTQMGGIIRHNRKCRDIAFLVLFIAFWVAMIVNSSFGFNKGNPLRLTFGLDYEGNVCGNRHAKRNLRELELRYWVNPNQVYQSGLKNSGFKLSNARSICLMECPIPSEDSLNWVCDYPEGDIHLTMDDWIDRNYDYFEFLTPDMRNTSLQLQGPCYPVIFPSVNVFWSCQFIARASNMSLRHWQQMGGVKINEDIVIDKSIHRSINSRSSVLKRYMADIAKSWPVLIVCGGILPLFLSVIWLLMIRHFVSGMPWITVILFNVLIVSVTMFYYLKAGWIGDDAISPIIGEHDPYYSVFGRELTHLRVAAVIMTVVMITSVLSSIAIVRRILMATSVLKVAAKVIGEVQALIIFPIMPYLILAIFYINWLSAALYLFSSGEILQNDCNSNCCAYDLASKRVNCDRCCGYSIHYTPHIAIAILFHLFGCYWVTQFFIACSSTVIAGSVASYYWARGETSPEIPFLPVFSSMKRLMRYSLGSVALGSLTVSFVESIRFMLESIRRKLKVYNMMPESRVGRVAFYFSQGFRKCIEWTIKSVNRNAYIMIAITGKSFCRASAIATELIISNILRIGKVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYRSAHNKISSPLFPVLVCWGLGYVVATLFFGVVEMSIDTIILSFCQDSEEHQGTAQYAPPLLIETLNDQNEMQRLTQ* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0289 697 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 19 696 IPR007603 GO:0022857|GO:0055085
Vvi19g0289 697 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0289 K15377 - vvi:100241764 1411.36