Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0277 ATGGAGAAGACCGAAGAAATGAAGGAGAAGCAGGTGGCGCAAATGCCCTCCCAGCGCAGGATAGCGCCGAACCTCGAGGTGAAGCTCGCAGCCATTGCCATCAGCCTGAACGTGCGGCTGAGATCCTCCGATATGCCGCCAGCCATGCAGGATCATGCGCTGCGATACTCCAGATCACTCGTCGACGCCATCCCGGACGCCACTCGTCCCAATCCAAGCCACATAGCTCGGGCCCTCAAAAAGGAGTTTGACTCGGTGTACGGCCCGGCGTGGCACTGTGTGGCGGGAACGAGTTTCGGGTCGTTTGTGACTCACTCGCCTGGTGGGTTCGTTTATTTCTCGATTGACTCGCTCTACATTCTACTGTTCAAGACGGAGGTGAAGTTGGTGACAGAACCACGCGCATGA 408 0.5735 MEKTEEMKEKQVAQMPSQRRIAPNLEVKLAAIAISLNVRLRSSDMPPAMQDHALRYSRSLVDAIPDATRPNPSHIARALKKEFDSVYGPAWHCVAGTSFGSFVTHSPGGFVYFSIDSLYILLFKTEVKLVTEPRA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0277 135 PANTHER DYNEIN LIGHT CHAIN 36 125 IPR001372 GO:0007017|GO:0030286
Vvi19g0277 135 SMART Dynein_light_2 33 125 IPR001372 GO:0007017|GO:0030286
Vvi19g0277 135 FunFam Dynein light chain 27 126 - -
Vvi19g0277 135 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 33 125 IPR037177 GO:0007017|GO:0030286
Vvi19g0277 135 Pfam Dynein light chain type 1 38 125 IPR001372 GO:0007017|GO:0030286
Vvi19g0277 135 SUPERFAMILY DLC 35 125 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0277 Vvi-Chr19 2950156 2950662 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0277 K10418 - vvi:100257280 270.396