Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0276 ATGGCTGTGTGTTCCTCATCTTCTTCTTCTGGATCTTCATCCACCACCAAAGCCTGGATCATCCACGGCATTCTCACCGGCGCTGCGGTGGCCGTGGCCCTCGGCGCCCACGCTTACCTTCTCCTCCGCCGATCCGGCAAGTTCAGGAGCCGGGTCGTTGGAATTATACCGGCCCGTTTCGCTTCGTCTCGGTTCCAGGGGAAGCCTCTCGTTCAGATCCTTGGAAAGCCCATGATCCAGAGAACATGGGAAAGGGCAAAACTAGCAACAACATTGGATCATGTTGTTGTGGCTACGGATGATGATAAGATTGCAGATTGCTGCCGAGGATTTGGTGCTGATGTGATAATGACGTCAGAATCGTGCCGAAATGGTACTGAACGTTGCAATGAAGCTCTTCAAAAGCTAGAGAAGCAGTACGATATTGTTGTCAATATCCAGGGGGATGAGCCTCTTATTGAACCTGAGATAATTGATGGGGTCGTTAAAGCTCTTCAGGCAGCCCCAGATGCAGTGTTTAGCACTGCTGTCACATCTTTAAAACCTGAAGATGGATTTGATCCAAATCGGGTGAAATGTATTGTAGACAATCGTGGTTATGCAATCTATTTTTCAAGGGGACTGATTCCCTTTAATAAGTCAGGGGAAGTCAACCAACAGTTTCCATATCTGCTTCATCTCGGTATTCAGAGCTATGATACAAAGTTCCTCAGAATATATCCAGACCTTCCACCTACACCACTTCAACTCGAGGAAGACCTGGAGCAGCTTAAAGTCCTTGAGAATGGATATAAGATGAAGGTGATTAAGGTTGATCATGAGGCTCACGGTGTAGACACTCCGGAAGATGTTGACAAGATAGAAAGCTTCATGCGCGAGAGGAACTTGTCTTAG 894 0.4743 MAVCSSSSSSGSSSTTKAWIIHGILTGAAVAVALGAHAYLLLRRSGKFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHVVVATDDDKIADCCRGFGADVIMTSESCRNGTERCNEALQKLEKQYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDGFDPNRVKCIVDNRGYAIYFSRGLIPFNKSGEVNQQFPYLLHLGIQSYDTKFLRIYPDLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVDKIESFMRERNLS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0276 297 NCBIfam 3-deoxy-manno-octulosonate cytidylyltransferase 54 284 IPR004528 GO:0008690
Vvi19g0276 297 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 1 296 - -
Vvi19g0276 297 SUPERFAMILY Nucleotide-diphospho-sugar transferases 52 294 IPR029044 -
Vvi19g0276 297 Pfam Cytidylyltransferase 54 264 IPR003329 -
Vvi19g0276 297 CDD CMP-KDO-Synthetase 51 290 IPR004528 GO:0008690
Vvi19g0276 297 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 50 292 IPR004528 GO:0008690
Vvi19g0276 297 FunFam 3-deoxy-manno-octulosonate cytidylyltransferase 50 292 - -
Vvi19g0276 297 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 43 292 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0276 K00979 - vvi:100248631 579.326