Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0275 ATGGAGGTGCAGAAAATGAAAACTGATGATCATGTATCTGACGACATCAAGCTCGACGTCCCTGACGACTCGGACGCGGTTCACGGCGTTAAGACCACTGGTGAAGACGCCCAGTCGGCTTTGCATGCGGAAGGTGAGGAGAATAGATTCTCCTTCCGAGCTCTAGTACGAGGCGCTTCAGCGCGAATCAGGAGTGTTTCTGATGAACTCAAGAGCCTCACCTCCTGGAAAAGCACTCCTTCAAGTCGCTACGAGCCCCCCAACTCGGCAGCACTCCATGCTTTGACTGGGCTCAAGTTTATCAGGCAGACGGATGGTTCTGCTGGGTGGCCTGACGTTGAGAAGAGCTTCCAACAGCTCACTGATTCCACCAATGGCTTGCTTCCTCGTTCACGCTTCGCTGAATGCATAGGGATGGGCCAGGAGTCAAATGAGTTTGGAGGAAAGCTATTCGACGCACTGGCTCGGAGGTGGGAAATCAAGGATGACTCAATTAATAAAGCTCAGCTCAAACAGTTCTGGGATCAGATCTCCGATGAGAGCTTCTATTCTAGGCTTCAAACTTTCTTTGACATGGTGGATAAAGACGCCGACGGTAGAATCACAGAAGAGGAAGTCAAAGAGATCATCACTCTCAGTGCTTCTACCAACAATCTCTCTAATATCCAGAAACAAGCTGACGAATATGCAGCACTGATCATGGAAGCGTTAGATCCAAAGAATGTAGGATACGTTCAGGTACACAAACTGGAGATGGTTCTATTGGAAGCTTCAAAGCAAACTACAAGGGGAGATAGCAAAAACCTTAGCCAATTGCTGAGTGAGCAACTGAGGCGCCCGGCACTGGAGAACAACCCATTAATAAGATGCTGTCAGGGCACCAAGTACCTTTTAAAGGACAACTGGCGGAGAGTTTGGATTATAGCTCTGTGGGTTGGAGTTATGTTGGGATTATTTGCATACAAGTTTGTGCAGTATCGAAACAGAGCTGCATATCAGGTAATGGGCCATTGTGTTTGCATGGCCAAGGGTGCGGCCGAGACACTGAAATTGAACATGGCACTGATTTTACTCCCAGTCTGCCGGAACACCATGACCTGGCTCAGGAACAAGACGAAATTAAGCGTTATTGTTCCCTTTGATGACAACCTCAATTTCCACATGGTGGTGGCCGTGGGAGTTGCAGTAGGAACCGGAATACATGTAGTTTATCATATGGCTTGTGATTTCCCTCGCCTTATTCACGCGAGTAGTGACAGATTTGCTCTCTTGGAGCCCTACTTTAAGGAACAACCCTCGTACTGGGAATTGGTTAAGGGAGTGGAAGGAGTGACGGGGATTTTAATGGTGGTGTTGATGGTAATAGCCTTCACACTAGCAACTCCATGGTTGAGGCGTGGAAAGCTAACTGGTTTCAACGCCTTCTGGTACTCCCACCACCTTTTTGTAATCGTCTATGCTCTGCTTGTTGTCCATGGCTTATATCTTTACCTGAGTAAGGAATGGTACCAGAAAACAACTTGGATGTACTTGGCAGTTCCTGTTGTGCTTTATGCCTTGGAAAGATTGACAAGAGCATTCAGATCCAGCATTCAGCCTGTTTGGATAGTAAAGGCGGTTGATTACCCTGGTCGTCGGGGTGTGTTGGCGCTTCACATGCAAAAGCCTGATAAAGACTTCGAATACAGGAGTGGGCAATACATGTTTGTCAACTGTCCTGCTGTTTCTCCCTTTGAATGGCACCCATTCTCAATTACTTCAGCCCCCAGAGACGACTATCTGAGTGTCCATATTCAAGCTGTTGGTGATTGGACTAGGCAAATCAAAAAGGTGTTCTCAGAGGCATCACCTAGCGGGAAAGGGGGTTACTCGGAAGGAGAAAACCGCCCAAATTTTCCGAAAGTGTTGATTGACGGTCCATATGGGGCACCAGCGCAAGAGTACAAAAATTATGAGGTGGTTATGCTGGTGGGGCTAGGGATCGGGGCGACCCCGATGATCAGCATTGTGAAGGACATTTTGCATAATATTAAGGAGATGGAGGAAGAAGAGAATGCTGATATGGAGGGGGGGAATGGAGCAGGAGGGAAGTATGACAATGAATTTAAGACTAGGAGGGCATACTTCTATTGGATGACGAGGGAGCAGGACTCTTTCCACTGGTTCGAAGGGGTGATGGACGAGGTGGCTGAATTGGACCATAATGAGGTGATAGAGCTGCACAACCACTGCACCAGTGTGCATGAAGAGGGTGATGCCCGCTCTGCATTAATTGCCATGATCCAAGACCTCAATCACGCCAAGAAGGGCTATGACGTTGTCTCTGGTACCCGTGTCAAGTCCCACTTCGGCAAGCCCAATTGGCGCAGCGTTTTTAAGTACATTGCTCGCAAAAACCCTCATACGAACGTTGGAGTGTTCTACTGCGGACCACCGGGACCTACCAAACAGCTACGCGAGCTGGCTTTAGGTTTCTCGCACGAGACCTCCACCCAATTTGATTTCCACAAGGAAAACTTCTAG 2523 0.4828 MEVQKMKTDDHVSDDIKLDVPDDSDAVHGVKTTGEDAQSALHAEGEENRFSFRALVRGASARIRSVSDELKSLTSWKSTPSSRYEPPNSAALHALTGLKFIRQTDGSAGWPDVEKSFQQLTDSTNGLLPRSRFAECIGMGQESNEFGGKLFDALARRWEIKDDSINKAQLKQFWDQISDESFYSRLQTFFDMVDKDADGRITEEEVKEIITLSASTNNLSNIQKQADEYAALIMEALDPKNVGYVQVHKLEMVLLEASKQTTRGDSKNLSQLLSEQLRRPALENNPLIRCCQGTKYLLKDNWRRVWIIALWVGVMLGLFAYKFVQYRNRAAYQVMGHCVCMAKGAAETLKLNMALILLPVCRNTMTWLRNKTKLSVIVPFDDNLNFHMVVAVGVAVGTGIHVVYHMACDFPRLIHASSDRFALLEPYFKEQPSYWELVKGVEGVTGILMVVLMVIAFTLATPWLRRGKLTGFNAFWYSHHLFVIVYALLVVHGLYLYLSKEWYQKTTWMYLAVPVVLYALERLTRAFRSSIQPVWIVKAVDYPGRRGVLALHMQKPDKDFEYRSGQYMFVNCPAVSPFEWHPFSITSAPRDDYLSVHIQAVGDWTRQIKKVFSEASPSGKGGYSEGENRPNFPKVLIDGPYGAPAQEYKNYEVVMLVGLGIGATPMISIVKDILHNIKEMEEEENADMEGGNGAGGKYDNEFKTRRAYFYWMTREQDSFHWFEGVMDEVAELDHNEVIELHNHCTSVHEEGDARSALIAMIQDLNHAKKGYDVVSGTRVKSHFGKPNWRSVFKYIARKNPHTNVGVFYCGPPGPTKQLRELALGFSHETSTQFDFHKENF* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0275 840 SUPERFAMILY Riboflavin synthase domain-like 546 644 IPR017938 -
Vvi19g0275 840 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 529 647 IPR017927 GO:0016491
Vvi19g0275 840 CDD EFh 149 211 IPR002048 GO:0005509
Vvi19g0275 840 MobiDBLite consensus disorder prediction 1 27 - -
Vvi19g0275 840 Pfam FAD-binding domain 547 644 IPR013112 GO:0016491
Vvi19g0275 840 Pfam Ferric reductase NAD binding domain 651 822 IPR013121 GO:0016491
Vvi19g0275 840 Pfam Ferric reductase like transmembrane component 344 490 IPR013130 -
Vvi19g0275 840 CDD NOX_Duox_like_FAD_NADP 536 840 - -
Vvi19g0275 840 SUPERFAMILY EF-hand 113 255 IPR011992 -
Vvi19g0275 840 Gene3D - 87 202 - -
Vvi19g0275 840 FunFam dual oxidase isoform X1 532 643 - -
Vvi19g0275 840 ProSiteProfiles EF-hand calcium-binding domain profile. 181 216 IPR002048 GO:0005509
Vvi19g0275 840 Pfam Respiratory burst NADPH oxidase 88 183 IPR013623 GO:0004601|GO:0050664
Vvi19g0275 840 SFLD Ferric reductase subgroup (FRE) 305 840 - -
Vvi19g0275 840 Gene3D - 642 840 IPR039261 -
Vvi19g0275 840 FunFam Respiratory burst oxidase homolog A 84 202 - -
Vvi19g0275 840 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 649 840 IPR039261 -
Vvi19g0275 840 PANTHER NADPH OXIDASE 146 840 - -
Vvi19g0275 840 SFLD NADPH oxidase subgroup (NOX) 88 840 - -
Vvi19g0275 840 SMART efh_1 185 213 IPR002048 GO:0005509
Vvi19g0275 840 FunFam Respiratory burst oxidase protein A 642 840 - -
Vvi19g0275 840 Gene3D Translation factors 531 616 - -
Vvi19g0275 840 ProSitePatterns EF-hand calcium-binding domain. 194 206 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0275 Vvi-Chr19 2925029 2929554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0275 7 840 Miscellaneous Gene Families AT5G47910 60.093 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0275 K13447 - vvi:100252158 1697.56