Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0273 ATGGAGACCGCCTCCTACTTCTACGAAACCCTATCCCCTCTGTCTCCTCCGCCGTCAGATCGATCTCCGCCGCCTTCCGATGAATCTCAGCCCTATTACGTGTACCGGAATCAAATCTCCCTTTCTTCTCTCAGTTACCCTTCGCCGGAAACCGCCGCCCCGGACTACTTCTCCCTCGACGCCCGCGCAGACGTCGAGGAGCCGAGCCCCGCGCGGTTTCGCACTCCGCCTCCGGCTTCAGAAGAAGAGGCGCCGGCTGTCGAGAGCGGGTGGTTCAGAGGGAATAGTCGGTTGAGAAGCCCCATGCTGAAGCTCCATAAAGAGATATTGGATTTCTCTGACTTTCTTTCTCCAACCCCCAAGGAACAATCTGCACGGAATGCAGCAATAGAATCTGTCTTTAACGTAATCAGATATATATGGCCCAACTGCAAGGTAGAAGTTTTTGGGTCATTCAAAACAGGGCTTTATCTTCCAACCAGTGATATTGATGTTGTGATTCTGGGTTCAGATATCAAGACTCCACAAATTGGGCTGTATGCTCTTTCTAGGGCATTGTCACAAAAGGGAATTGCAAAGAAAATACAGGTTATTGCTAAGGCCCGTGTTCCAATTATTAAATTCATAGAGAAGAGAAGCAGTGTTGCTTTTGATATAAGTTTTGATGTGGAAAATGGACCAAAAGCTGCTGAGTATATTCAGGATGCTATATCAAAGTGGCCCCCACTGCGGCCATTGTGTTTAATCTTGAAAGTTTTTCTACAACAGCGAGAATTGAATGAGGTATATTCTGGTGGAATTGGTTCTTATGCCCTCCTTGCTATGCTCATAGCAATGTTGCAGAATCTCCAAGAGTGGAATGCTTCTGTAGAACATAACTTGGGAGTCCTTTTGGTAAACTTCTTTGACTTTTATGGACGCAAATTGAACACTGTGGATATTGGTGTAACATGCAATGGGCCAGGAACCTTCTTCTTGAAAAGTACCAAAGGGTTTGTAAATAAAGGGCAGAAGTTTCTTATCTCCATTGAGGACCCACAGCTACCAGGCAATGACATTGGGAAAAATTCCTTCAACTATTTCCAGATTCGATCAGCTTTTTCTATGGCTTTCTCGACACTGACAAATGCAAGGACCATCTTGGGCCTAGACCCCAACCGGAGCATTCTTGGTACCATAATAAGACCAGACCCAATCCTGCTGGAACGAAAAGGAGGTTCTAATGGGACCATGACTTTTGACCATTTGCTCCCTGGGGCAGGGGAACCATTGTCGCCACAAACTGGGGGCCAAGAGTTATTATGCAACTGGCAGGTTGAGGATGCAGAAGAAGAGCCACTGCCACGCAGCAATCCAATTGCAGGGGATGGCAGTGCAAATTCTTCAGGAAAGAAACGGAAGGCTTCGAAAGAGAGACTTCGTAACAAGGTGAAAGAACACGCAGATATGGAGAAAGACAAAAGTAAAAAGAAGAGAAGGTGGAAACATCAATGA 1494 0.4632 METASYFYETLSPLSPPPSDRSPPPSDESQPYYVYRNQISLSSLSYPSPETAAPDYFSLDARADVEEPSPARFRTPPPASEEEAPAVESGWFRGNSRLRSPMLKLHKEILDFSDFLSPTPKEQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYALSRALSQKGIAKKIQVIAKARVPIIKFIEKRSSVAFDISFDVENGPKAAEYIQDAISKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLQNLQEWNASVEHNLGVLLVNFFDFYGRKLNTVDIGVTCNGPGTFFLKSTKGFVNKGQKFLISIEDPQLPGNDIGKNSFNYFQIRSAFSMAFSTLTNARTILGLDPNRSILGTIIRPDPILLERKGGSNGTMTFDHLLPGAGEPLSPQTGGQELLCNWQVEDAEEEPLPRSNPIAGDGSANSSGKKRKASKERLRNKVKEHADMEKDKSKKKRRWKHQ* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0273 497 MobiDBLite consensus disorder prediction 442 497 - -
Vvi19g0273 497 MobiDBLite consensus disorder prediction 67 87 - -
Vvi19g0273 497 FunFam non-canonical poly(A) RNA polymerase PAPD5 118 226 - -
Vvi19g0273 497 Gene3D - 101 376 - -
Vvi19g0273 497 SUPERFAMILY Nucleotidyltransferase 101 253 IPR043519 -
Vvi19g0273 497 CDD NT_PAP_TUTase 125 235 - -
Vvi19g0273 497 PANTHER POLY(A) RNA POLYMERASE 54 470 IPR045862 GO:0043631|GO:1990817
Vvi19g0273 497 MobiDBLite consensus disorder prediction 1 31 - -
Vvi19g0273 497 SUPERFAMILY PAP/OAS1 substrate-binding domain 241 379 - -
Vvi19g0273 497 Pfam Nucleotidyltransferase domain 136 221 IPR002934 GO:0016779
Vvi19g0273 497 Gene3D Beta Polymerase, domain 2 118 226 IPR043519 -
Vvi19g0273 497 FunFam Poly(A) RNA polymerase cid14 219 376 - -
Vvi19g0273 497 MobiDBLite consensus disorder prediction 474 488 - -
Vvi19g0273 497 Pfam Cid1 family poly A polymerase 293 349 IPR002058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0273 K03514 - vvi:100259006 938.717