Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0270 ATGACTATGATTCTGAATTCTTGCACACCCACCTCTGCAAACAGGTGGTATCTGTTATCAGGGCTCCAAGCCTCCTTCTATGTAGTCCTCTTCATCATCTGTGCAGCCTCTGTATCTTGCTCCCCATCTCAAATCTCCTACCTTGATCACTGTTCTTCCATTGTCCCAGAATTTCCCCCCACTGTTCGGGAGTTCTCCACCTTGCTGTTTCCCGGAACCCAAAATGGATACTGTCATGGGGGAGATGGAATTTTAAGCCAGGATTCCTCTGACTACTCGGCAAGCTTCTCTAAACTTCTGGCATTGCAGACCCGGAAAATATACAGAACTGAGGCTGAAGGTGTTTTCAAGGTGGAAGGGAGTCTGAACCTCCAAAGCAATAATAGGTATTACTATGGGGAAGATTTGAGAGAGATGGAGAATTCCTATTCTGGGGTTCTGCCTACAAGCTTTTGGGGTGGTTCAGTGACCTTTCTTCTACATGGGTTCTGGTCAGAATCTTCTGGGAAGCTTTGCATGGTGGGAACAGGCTCTGCCTACTCCAGAGAAGGTGAGTTGCTTGATCTTGCTGCCGTGCTCAAGCTCAATAACGTAAAAAATCTGAGCACTGTTACTGACTTGGTTGGTGGGACTTTAGAGAGCTTGAATTTGGCTAGTGATTCCAATTACTTTGAACCAATTTCCATGTTGGTGTTTCCTCAAATGAATTACAAGTACACTTTGGTTTCTGAGGTCGGTTTGGAGTCAAATATCAGTATCTGTTCAATGCTTTCAAGGCCAGATAATTGGTTTGAATTGGAGTATCCACTTGACTGCTATTCTCTGCAGAATTGCACTCCTTTTGGTGGGGAAATTGGATATCTTCCCCATTTCATAAACATAAAAGCAAGTCAGTGTTCAGAGGATGAACGGAGGTTGAAAATTATGATCAAGTTTCATAACTTTAGCTATGTTGACTATAACCAACTGCCAAGTCCCAACATGACATTGATTGGGGAGGGGTGGTGGGATGCCAAGAACAATCGGCTATGTGTCGTTGCCTGTCGAATCTTGAACACCATGCAGTCTCTCGCTAATGCTCACATCGGTGATTGTTCAATTAGGTTGAGTTTGAGATTCCCAGCAATCTGGTTGATCAGAAGCAGAAGTAACATTGTGGGGCAAATTTGGAGCAACAAAACTATAGATGATTCAGGGTACTTTAATAGGATCATGTTTCAAAGTCCTGAGAATATAAGGCTGGAGATTCCAGGCTTGAAATATGAGTACACTGAAATTGACAGGGCAGGAAAGCTATGCCAGAAAAAAAAGTGTGCTGAAAATAAAGGGGAAAGATACCCGAATCCAAACGACTTTTCTTTTGATATGCAGTTTGACATGATGGTTAAAAACTCCACAGGAGTGATGGCATGGGGCTCTGCAGCCCCTTTCTTTGTGGGTGATAATCTTTATGACCCTTTTGAGTATGGCATTCCTTCCTCAAGCTCAGAGCCAGGAAGCTCTGTAGTTGAAGCAAATGCCAGGCATATTAGCCCAGTGAATATCAGCTACAAGATAAGCTTCACATTGGAACCTGGTGCTGAATTTGGTGGTATCATCAGCCCATTTAGCGAATCTTTGGGTAGGCATATGAAAGTAGATATTTCTGCTGAAGGGATTTATGATGCCAAAACAGGAGGTCTGTGTATGGTAGGCTGCAGAAGGCTGAGCTCAAAGGCTCATATTTTGACAGATGACTCTGTAGATTGTGAGATTCTTGTGAACCTTCAATTCCCTCCATTAGGTTCAGGGAATGAAGGGTATATCAAGGGAAGTATTGAAAGCACAAGGGAAAAATCTGACCCTCTTTACTTCGAACGTCTGGATTTGTCTTCAACTTTTTCTAGTAAGTTTGAAGAAAGCTGGTTCATTGGGAGGATGGAATTGGAGATCATCATGGTTCTGATGTCCAACACCCTTACATGTTTCTTTGTGGGATTGCAACTCCTTCATGTGAAGAAGAGCCCTGAAGCCCTTCCTTCTATCTCATTAGCCATGCTTGTAATTCTTACTTTCGGGTTCATGATCCCTCTCGTGATGAACTTTGAAGCCTTATTCTTGGGAAGCTTTACTGATCAAAATGTTTGGCTTGACAATGGCAGATGGTTTAAATTGAACAATCTGCTCATACTGGCTGCTTTTCTGTTGCAATTCTGTCTTCTCCATTTCACATTGTCAGCCAAATTAGGCGATGGAAAACAGAAGGGCTTGTGGGCGGCTGCAGAGAAGAATGCTCTCTATCTGTCCTCACCATTATATATAGCTGGCTGCTTAATTTCCATTTTTCTGAACTGCAAGCAGAACAACCTGCCTTTTTTCCACCTTATGAATTACCAGCTGCATTCTCTTTGGAGGGACTTGAGATCTTGTTCTGGATTGGTCCTTGATTGGTTCCTTTTACCTCAAATCCTGCTCAATTTGTTCATAGACTCAAGAGAAAAAGCTCTTTCTCATGCATTTTACATTGGAACAACTTCCATCAGATTGCTCCCACATGCATATGAATTGTACAGTGCTTTGAGCTTTGCCCGAGGCTTCGATGGGTCATGGAGCTATGCAAATCCTGGTGCAGGCTTTTACACTACTGCTTGGAATGCCATGATTCCTTGTGGGAGTCTGCTGTTTGCTGTGGTCCTCTTCTTGCAGCAGAAATATGGGGGTCTATGCATCCTCCCCAAGAAGCTTAAGGGCCAGAAGTATGTGAGAATGTAG 2751 0.4329 MTMILNSCTPTSANRWYLLSGLQASFYVVLFIICAASVSCSPSQISYLDHCSSIVPEFPPTVREFSTLLFPGTQNGYCHGGDGILSQDSSDYSASFSKLLALQTRKIYRTEAEGVFKVEGSLNLQSNNRYYYGEDLREMENSYSGVLPTSFWGGSVTFLLHGFWSESSGKLCMVGTGSAYSREGELLDLAAVLKLNNVKNLSTVTDLVGGTLESLNLASDSNYFEPISMLVFPQMNYKYTLVSEVGLESNISICSMLSRPDNWFELEYPLDCYSLQNCTPFGGEIGYLPHFINIKASQCSEDERRLKIMIKFHNFSYVDYNQLPSPNMTLIGEGWWDAKNNRLCVVACRILNTMQSLANAHIGDCSIRLSLRFPAIWLIRSRSNIVGQIWSNKTIDDSGYFNRIMFQSPENIRLEIPGLKYEYTEIDRAGKLCQKKKCAENKGERYPNPNDFSFDMQFDMMVKNSTGVMAWGSAAPFFVGDNLYDPFEYGIPSSSSEPGSSVVEANARHISPVNISYKISFTLEPGAEFGGIISPFSESLGRHMKVDISAEGIYDAKTGGLCMVGCRRLSSKAHILTDDSVDCEILVNLQFPPLGSGNEGYIKGSIESTREKSDPLYFERLDLSSTFSSKFEESWFIGRMELEIIMVLMSNTLTCFFVGLQLLHVKKSPEALPSISLAMLVILTFGFMIPLVMNFEALFLGSFTDQNVWLDNGRWFKLNNLLILAAFLLQFCLLHFTLSAKLGDGKQKGLWAAAEKNALYLSSPLYIAGCLISIFLNCKQNNLPFFHLMNYQLHSLWRDLRSCSGLVLDWFLLPQILLNLFIDSREKALSHAFYIGTTSIRLLPHAYELYSALSFARGFDGSWSYANPGAGFYTTAWNAMIPCGSLLFAVVLFLQQKYGGLCILPKKLKGQKYVRM* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0270 916 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 28 912 IPR021319 -
Vvi19g0270 916 Pfam Protein of unknown function (DUF2921) 49 904 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0270 Vvi-Chr19 2856127 2858877 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0270 - - vvi:100260511 1840.47