Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0260 ATGACTGGAGGGTTGTTGGGTTTACGTAGTGGAAGTTATGGGTCTCTGCAACATCTTCAAAATGGTGCGTTTCACCCTCAGCCTCAATTTGTTGGGCGCAAACCTTCAAAGATGTTACCTTCTGGTTCTAGGGAAAAGGAAAGGCTTCTTCCCTATCTTTTCAGATTTTTGAGTCGCAGAAGGGTTGGAATGCTTATTTTGGTTGGCTTTGCCTTTTTGGTATTCTTATCAGGTTTCTCAACTGTCAGTAAAGATGCACCGGAAAGCAATAGTGTGAGCATTACCCAGCATATCCATCACATAAATCCTTATGACAATGGGGAATCTGATCAAGATCTCCCATTTTTTTTGCCGAGGATAGAAGTCAAGCATAAGGATAATGTTGATTATATACCAAGCACTGTGACAGAAAGTGGAGAAAATAATGCCCACCGTCCTCCCCTTCCTCCTAGCACTTCTGCTGTTGCAGCTGTTGTAGGGTATACCCCTCCATTGCACCATCCATGTGAAAATTTTGCATTTCCTCCACCTCCTCCACCAGATAGGAAACGGATTGGACCACGCCTGTGTTACCTTCCAGTGGAGCAGGCTATTGCTAGCATCCCAAGCTCCTCATCCCCATCACCTCTGCTTAAACAGTTAAATTATGTTCATGAGGAAAACCCAATTAAAACTGAACCACATGGAGGCTCTGAATTTGGTGGATATCCTTCACTAAAACAGAGGAATGATTCCTTTGATATAAAAGAGTCAATGACTGTGCATTGTGGATTTGTCACAGGAAGTAAGCCTGGTCATCATACTGGATTTGATATTGATGAAGCTGACCTTAAAGAGTTGGAGCAGCCTCATGAAGTCATTGTTGCATCTGCTATATTTGGAAACTATGACATTATACAACAGCCCAGGAATGTTAGTGAAGCTGCCAGGAAAAATGTCCCCTTTTATATGTTTATTGATGAAGAAACAGAAGCATATATGAGGAATTCTAGTGTCTTGGACAGCAGTAAGAGGGTTGGATTATGGAGGATCATTCTTGTACATAACATTCCATACACTGATGCAAGACGCAATGGAAAGATTCCAAAGCTTCTATTGCACAGAATCTTTCCCAATGTCCGGTTTTCCATATGGATTGATGGAAAACTTCAGCTTCTTGTGGATCCATACCAAGTTCTTGAGAGGTTCTTATGGCGTCAAAATGCTAGTTTGGCAATCTCAAGACATTATAGGCGCTTTGATGTGTTTGAAGAAGCTGAAGCTAATAAAGCTGCAGGGAAGTATGATAATGTCTCCATTGATTACCAGATTGAATTTTACAAAAATGAGGGTTTAACACCTTATTCCGAGGCTAAGCTTCCTATAACTAGCGATGTTCCTGAAGGTTGCGTGATTGTAAAGGAACATATCCCCATTACAAATCTTTTTACCTGTCTATGGTTCAATGAAGTTGATCGCTTTACTTCCAGGGATCAGTTAAGCTTTGCCATAGTGAGGGACAAAATAACGTCACAAGTCGATTGGAACATCAGCATGTTTTTGGATTGTGAAAGACGAAACTTTGTATATCAGGCATACCATAGAGATTTACTGGAGCACATGGCTCCCCCACCACCTGTGGTACATCCACCACCTCGAGATGTGGTGATCCCAGGCAATCGTCAAGGTGCGGTCATCCCTGAAAATGTGGCTGGAAGGACCCCTGCAAGGAAGAACCCCCCCAAACGTGGAAGAGGAGAGAGGAGATCTGGTTCAAGGCGTCACCGCAAAGTTGGCCCTGGCTTTAGGGATAACAATTCAATTTGA 1806 0.4269 MTGGLLGLRSGSYGSLQHLQNGAFHPQPQFVGRKPSKMLPSGSREKERLLPYLFRFLSRRRVGMLILVGFAFLVFLSGFSTVSKDAPESNSVSITQHIHHINPYDNGESDQDLPFFLPRIEVKHKDNVDYIPSTVTESGENNAHRPPLPPSTSAVAAVVGYTPPLHHPCENFAFPPPPPPDRKRIGPRLCYLPVEQAIASIPSSSSPSPLLKQLNYVHEENPIKTEPHGGSEFGGYPSLKQRNDSFDIKESMTVHCGFVTGSKPGHHTGFDIDEADLKELEQPHEVIVASAIFGNYDIIQQPRNVSEAARKNVPFYMFIDEETEAYMRNSSVLDSSKRVGLWRIILVHNIPYTDARRNGKIPKLLLHRIFPNVRFSIWIDGKLQLLVDPYQVLERFLWRQNASLAISRHYRRFDVFEEAEANKAAGKYDNVSIDYQIEFYKNEGLTPYSEAKLPITSDVPEGCVIVKEHIPITNLFTCLWFNEVDRFTSRDQLSFAIVRDKITSQVDWNISMFLDCERRNFVYQAYHRDLLEHMAPPPPVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPPKRGRGERRSGSRRHRKVGPGFRDNNSI* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0260 601 MobiDBLite consensus disorder prediction 557 601 - -
Vvi19g0260 601 MobiDBLite consensus disorder prediction 571 589 - -
Vvi19g0260 601 Pfam Protein of unknown function (DUF616) 214 527 IPR006852 -
Vvi19g0260 601 PANTHER ALKALINE CERAMIDASE-RELATED 48 529 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0260 Vvi-Chr19 2771104 2777510 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0260 - - vvi:100246918 1170.61