Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0257 ATGACGATCCATTCTCTCGTTATCCAAAAGCTTCTGAGCACCAATGCCCATATGGGGCGGCGCTTGGTGGAGCACCATTTCAAGGTCTACACCTATGGCTTCCGCAACGGGTGCGCCGTCATCGACTCTGACAAGACCCTCATCTGCATGCGAAATGCCTGCGACTTCATGGCCTCGCTCGTCCGCCAAAAGGGTCGTTTCCTCTTCGTCAACACCAACTCCCTCTTCGATGAAATCGTCGAGCAGATGACCCGAAAAATCGGATGCTTCACCCCCGACGCCCCCTGGCGACTCGGCGGCTTTCTCACCAACAGTTCTAGTCCCAAGAAGTTTCGGTCCCGAAACAAGAAGATCATTTTCGGCCCGAGTCAGCCGCCTGACTGTGTCGTGATTTTGGATACCGAAAGGAAGTCTTCGGTGATTCAGGAGGCGTCTCGGCTGGAGATACCGATTGTTTCGGTGGTGGATCCGAGTATGCCGCTGGACACGTTTAAGAAGATCGCCTACCCTATTCCAGCTAAAGATTCAGTGCAGTTTGTGTATTTGTTTTGTAATTTGATAACCAAGACATTTCTTTACGAGCAAAAGAAAATGGGGCTTGGGAAGAAAGAGGACGAAACTGCCCGGAAATTGGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTTCAGAAGGCAGAGGAAAAATGAGAAATGA 771 0.4449 MTIHSLVIQKLLSTNAHMGRRLVEHHFKVYTYGFRNGCAVIDSDKTLICMRNACDFMASLVRQKGRFLFVNTNSLFDEIVEQMTRKIGCFTPDAPWRLGGFLTNSSSPKKFRSRNKKIIFGPSQPPDCVVILDTERKSSVIQEASRLEIPIVSVVDPSMPLDTFKKIAYPIPAKDSVQFVYLFCNLITKTFLYEQKKMGLGKKEDETARKLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFRRQRKNEK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0257 256 FunFam Ribosomal protein S2 9 214 - -
Vvi19g0257 256 Coils Coil 213 213 - -
Vvi19g0257 256 ProSitePatterns Ribosomal protein S2 signature 1. 8 19 IPR018130 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 PANTHER 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR 1 207 IPR005706 GO:0003735|GO:0006412|GO:0015935
Vvi19g0257 256 SUPERFAMILY Ribosomal protein S2 8 199 IPR023591 -
Vvi19g0257 256 Gene3D - 9 218 - -
Vvi19g0257 256 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 PRINTS Ribosomal protein S2 signature 37 46 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 Pfam Ribosomal protein S2 123 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 Pfam Ribosomal protein S2 11 109 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 CDD RPS2 11 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Vvi19g0257 256 Coils Coil 247 251 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0257 K00963 K02967 vvi:100264069 429.483