Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0253 ATGTGTTCTTTTGTTCCTGATAATTGCAAAATAAATGGGCTTTGCTACTATTCATCATTTGTCGCGTTTTCTATTTCATTTGGAGACACCATGGGTGTGGAGGTTGTGGGATTTGAAGCGGCCCCGGCACCTGTGGAGGCTGGAACTGAAGCAGAAAGTGCTTTGTTGCATGACAAGGAGAATGGGAAACTCGATCAAGGACCCGGAGTTACCGAGCCCATAAAATTTGGTTCTCATGGAGATGAGCCTGTTAAAGGGGAAGGAAATAATGTTTCTGATAACTTTCCAAAGGATGTGGTTGATGAGTGGCCTGCACCAAAGCAGATTCATTCATTTTATTTTGTCAAATATAGATCTTATGATGATCCGAAAATAAAAGCCAAACTTGATCAGGCTGATAAAGAGATTCAAAGGAGGAATCAGGCCCGATTTCAAATCACTGAAGGATTGAGGGCCAAAAAGTCTGATCGAGCACAGATGCTTTCTCAGTTGAAGTCTCTGAAAGCTGAGGATGAGCAGTTCAGAATGATTGTGGATGGGAAGAGAAAGGAAATGGAACCTCTGCAGCATGCTCTGGGAAAGTTGCGCAGTACAAACAGTGCTAACCGAGAGAGGGGTGGTACTCTATGTTCATCTGAGGAAGAACTTAATGATCTTATTCAAAGCTTACATTACCATATGCAACATGAGAGCATCCCGTTGGCTGAAGAGAAGCAAATCCTTAGGGAAATCAAACAGCTTGAGGCAACAAGGGAAAAAGTTATTGCTGGTGCTGCTATGAGGGCAAAGATTCAGGACTCATTGGGTCAGAAAGAGGCCATCCAAGACCAGGTCAAACTTATAGGTGTTGATTTGGATGGGGTGAGGAAGGAGAAGCAAGTTGTCATGGCCAAAATCAAGCAACTTAGGGATGATTTGAAGGGCATAGACAGTGAGATTGATTCTTTGATGGAGGAACTGAAGGCTGTGTCAGAAAAGAGGGACAAAGCATATGAAGGTCTTCAGGCACTGAGAAAACAGCGTGATGAGGGTAATGCACATTTCTACCAAAACCGTGCTCTCTTGAACAATGCCAGAGAGCTTGCTGGGAAGAAGGATATAAAGGCCCTTGAGGAACTTTCACATTCTGAGGTTGAGAAATTTATGTCATTGTGGAGCAGCAATAAGGCTTTTAGAGAAGATTATGAGAAAAGAATTTTGCCATCATTGGACAGTCGTCAATTGAGTAGGGATGGACGAATGAGGAACCCCGATGAGAAGCCATTGGTGGTATTGGAAGCACCAACACCCTCTGAAACAGAGACAGTGGCAAAAGCTCCTGTCAAACGATCTAAGGAAGATTCCAAGCCGCCTCCACAACATGATACTCTTCCCTCCCAGAAGGTCCAGAAAGAGGCAAATGATAGAGCTACAGATTCAGGAATTACTTTGGAACGTGGTGACAAAGAAGAGAAGGAGATCATTCCTGGGCTAGAAAAACATCAAAAGGGTCCTTCCTTGGACAATGAAGTTGATGCTGCAAAGTTGAAGGAAATGAAGAGAGAGGAGGAGATTGCAAAAGCTAAGTTGGCCTTGGAAAGGAAGAAGAAGCTGGCAGACAAATCTGCAGCCAAGGCAGCCATAAGAGCTCAGAAAGAGGCTGAAAAGAAGCTCAAGGAAATTATTACTTCACTTTTTATTTTTCTAGAATTTGCTAATTAG 1701 0.4333 MCSFVPDNCKINGLCYYSSFVAFSISFGDTMGVEVVGFEAAPAPVEAGTEAESALLHDKENGKLDQGPGVTEPIKFGSHGDEPVKGEGNNVSDNFPKDVVDEWPAPKQIHSFYFVKYRSYDDPKIKAKLDQADKEIQRRNQARFQITEGLRAKKSDRAQMLSQLKSLKAEDEQFRMIVDGKRKEMEPLQHALGKLRSTNSANRERGGTLCSSEEELNDLIQSLHYHMQHESIPLAEEKQILREIKQLEATREKVIAGAAMRAKIQDSLGQKEAIQDQVKLIGVDLDGVRKEKQVVMAKIKQLRDDLKGIDSEIDSLMEELKAVSEKRDKAYEGLQALRKQRDEGNAHFYQNRALLNNARELAGKKDIKALEELSHSEVEKFMSLWSSNKAFREDYEKRILPSLDSRQLSRDGRMRNPDEKPLVVLEAPTPSETETVAKAPVKRSKEDSKPPPQHDTLPSQKVQKEANDRATDSGITLERGDKEEKEIIPGLEKHQKGPSLDNEVDAAKLKEMKREEEIAKAKLALERKKKLADKSAAKAAIRAQKEAEKKLKEIITSLFIFLEFAN* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0253 566 Coils Coil 285 340 - -
Vvi19g0253 566 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 29 553 - -
Vvi19g0253 566 Coils Coil 506 529 - -
Vvi19g0253 566 MobiDBLite consensus disorder prediction 461 502 - -
Vvi19g0253 566 MobiDBLite consensus disorder prediction 60 91 - -
Vvi19g0253 566 Coils Coil 150 170 - -
Vvi19g0253 566 MobiDBLite consensus disorder prediction 408 502 - -
Vvi19g0253 566 MobiDBLite consensus disorder prediction 438 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0253 Vvi-Chr19 2703212 2708405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0253 - - vvi:100267528 975.311