Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0239 ATGGAGAACACTGTAAAAACTCAAGACAGAGAAAAAACATCTCCCATAACCTCTCCAAACAGCAATGGAAGCAACTGCAGCAGCAGCAGTAACAGCACCGGCCTCCAAATTCAAACCCCACCACTGACCCCGAAGCCCATCTCTAGATCAGATTCCAATCCTTACCCAACAACCTTTGTCCAAGCTGATGCCAACTCCTTCAAACAGGTGGTTCAGAGGCTCACTGGATCCTCCAAACCAACCCAAGATCCACCCACGAAGGCCTGCAACATACCACCCATCAGAACTGGACAGAAGAAGCAAGGATTCAAGCTGTATGAGAGGAGGAGCCAGCTCAAGAACGGCCTCATGATCAACCCTCTGGTGCATGGCTACGTGCAAAATAATTCAGGGTTTTCGCCTAGAAAACCTGAGATCTTGTCCCCCAGTTTGCTGGATTTTCCGAAGCTTGTGCTCAGCCCAGTTACACCATTGACGGAAGACCCCTTTAACAAGTCCTCAGAAGAGAAAGCCATAGCTGAGAAGGGCTTCTACCTCCACCCTTCACCCATGTCCACCCCTAGGGACTCTGAGCCTCAGCTTCTGCCGCTGTTTCCGGTGACCTCCCCTCGAGTTTCCGGGTCGTCTTCTTGA 633 0.5103 MENTVKTQDREKTSPITSPNSNGSNCSSSSNSTGLQIQTPPLTPKPISRSDSNPYPTTFVQADANSFKQVVQRLTGSSKPTQDPPTKACNIPPIRTGQKKQGFKLYERRSQLKNGLMINPLVHGYVQNNSGFSPRKPEILSPSLLDFPKLVLSPVTPLTEDPFNKSSEEKAIAEKGFYLHPSPMSTPRDSEPQLLPLFPVTSPRVSGSSS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0239 210 MobiDBLite consensus disorder prediction 10 59 - -
Vvi19g0239 210 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 20 206 IPR039611 -
Vvi19g0239 210 MobiDBLite consensus disorder prediction 72 100 - -
Vvi19g0239 210 Pfam VQ motif 54 79 IPR008889 -
Vvi19g0239 210 MobiDBLite consensus disorder prediction 1 59 - -
Vvi19g0239 210 MobiDBLite consensus disorder prediction 179 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0239 Vvi-Chr19 2589645 2590277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0239 - - vvi:100262369 407.527