Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0233 ATGGTGTGTCTGGAGTACTGGGCATTTGAGATTTTGGTTTTGCTAGCTGGGTTGATGCCTAATTCAGAAACAACCACTTCATTAATAGCAATGTGTGTGAACACAGGAGCTATAGCATTCATGATTGCTTATGGTCTCAGTGCAGCAGCAAGCACAAGGGTGTCAAATGAACTGGGAGCAGGCAATCTGGACCGAGCCAAGCACGCCATGGCAGTGACTCTCAAGATCACCGACTGTCTTGCTTTGCAGTTGTTCTACTCCTAG 264 0.4697 MVCLEYWAFEILVLLAGLMPNSETTTSLIAMCVNTGAIAFMIAYGLSAAASTRVSNELGAGNLDRAKHAMAVTLKITDCLALQLFYS* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0233 87 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 81 - -
Vvi19g0233 87 Pfam MatE 1 82 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0233 Vvi-Chr19 2528612 2529162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0233 K03327 - vvi:100264179 140.969