Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0232 ATGGGTCTCAACGACAAGGACATCGTAGCTTTCTCTGGGGCCCACACCCTGGGAAGGTGCCACAAGGAGCGCTCTGGATTTGAAGGACCTTGGACTTCCAATCCTCTGATCTTTGATAACAGCTACTTCACGGAACTCCTTGGCGAAGAAAAGGAAGGTCTTCTATAG 168 0.506 MGLNDKDIVAFSGAHTLGRCHKERSGFEGPWTSNPLIFDNSYFTELLGEEKEGLL* 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0232 55 PRINTS Plant ascorbate peroxidase signature 1 22 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 PRINTS Plant ascorbate peroxidase signature 23 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 PRINTS Plant ascorbate peroxidase signature 49 55 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 SUPERFAMILY Heme-dependent peroxidases 1 49 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 Pfam Peroxidase 1 48 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 PRINTS Haem peroxidase superfamily signature 31 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 PRINTS Haem peroxidase superfamily signature 7 22 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi19g0232 55 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 53 IPR044831 GO:0004601|GO:0034599
Vvi19g0232 55 Gene3D Peroxidase, domain 2 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0232 Vvi-Chr19 2514869 2515036 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0232 K00434 - sly:778224 93.5893