Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0217 ATGGGAAGGGTCTTTGTGGTTGAGCTCGAGGCCAGGGCTTATGAATGCAAGTTCTGCAAAACCCACTTGGCTCTGGCTGATGATCTCGTCTCTAGGGCTTTTCACTGCCGCAGGGGAAAGGCATACCTCTTCAATAATGCGGTGAATATCACAGTTGGTGCTCAAGAGGAGAGGATGATGATTTCAGGAATGCATACTGTAGCAGATATATTTTGCTGCTGTTGTGGACAAATTGTTGGCTGGAAATATGAGATGGCACACGACAAGACCCAAAAGTATAAAGAAGGGAAATTTGTTCTTGAAAGAGGGAGGATCATTGATGGGGTTGACTCAGAATTCTACATCGATACCCGAGCTAACATGAGTGATGCTGAAGATGCTTGA 384 0.4531 MGRVFVVELEARAYECKFCKTHLALADDLVSRAFHCRRGKAYLFNNAVNITVGAQEERMMISGMHTVADIFCCCCGQIVGWKYEMAHDKTQKYKEGKFVLERGRIIDGVDSEFYIDTRANMSDAEDA* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0217 127 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Vvi19g0217 127 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 105 IPR004910 -
Vvi19g0217 127 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 107 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0217 Vvi-Chr19 2373317 2377850 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0217 - - vvi:100267441 266.544