Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0211 ATGGAGAATGGAACAAATAAATGGGGTTTTGAGGACGCTGAGAACGGGCCTGATACAACAACTACAATCACCATCAAAGGCCTTATCAGCCTGTTGATGGCCAACATTGATGAGGGCAACAACAAGAGACTCATCTCTCTGGGTATGGGTGACCCTTCAGTCTACACTTGCTTCCACACCAGCCATGTTGCCACAGAATCTGTTGTTGATGCTGTTGAATCCAACAAGTACAATGGCTATGCCCCAACTTCGGGTCTTCCTCAAGCAAGAAAGGCAATTGCTGAATATCTGTCTCGGGATCTTCCATATAAGTTATCGCTTGATGATGTTTTTATCACATCTGGCTGCACACAAGCTATTGATGTTGCATTGTCAATTCTTGCTCGTCCTGGTGCAAATATCTTGATTCCAAATCCAGGTTTCCCAATTTATCAACTTTCTGCTTCTTTTAGAGGTCTAGAAGTTCGTTACTATGATCTTCTCCCTGAGAAGGGGTGGGAAGCTGATCTTGATGCTATCAAAGCCCTTGCTGATCAGAATACTGTCGCATTGGTAATTATAAACCCCAACAATCCTTGCGGGAGTGTATATTCTTATCAACATTTGAAGAAGACTGCAGAAACTGCAAGGAAGCTCAGCATTCCTGTCATTGCTGATGAAGTCTATGGGCACCTTGCTTTTGGGGGTAACCCATTTGTGCCAATGGGAGTTTTTGGATCGATTGTTCCAGTTCTTACTCTTGGATCTCTATCAAAGAGATGGATAGTTCCTGGTTGGCGCCTGGGTTGGTTTGTGATAACTGATCCCAGCTGCTTGTTCATTACTCCCAAGATTGTTGAGCGCTTGAAGAAGTATTTTGATATTTTAGGAGGTCCTGCAACATTCATTCAGGCTGCAGTCCCTCGTATCATGGAGCAAACTGATGGGACTTTCTTTAAGAAAACCATCAACATACTAAAGCAGGCCTCGGATATTTGTTTGGAAAAGATCCAGGAGATCCCTTGCATTACTTGCCCACATAAACCAGAGGGATCCATGGCTGTAATGGTGAAGCTGAACCTTTCACTACTGGAAGATATTAATGATGATATTGACTTCTGTTTCAAGCTGGCCAAAGAGGAATCGGTGATCATTCTTCCAGGAGTTGCAGTGGGACTGAAGAATTGGCTTCGCATTACCTTTGCTGCTGATCCATCCTTTCTTGAAGAAGGTTTAGAGAGGATAAAATCTTTCTACCATAGGCACAGTAATATACAACATAGCAACTAA 1269 0.431 MENGTNKWGFEDAENGPDTTTTITIKGLISLLMANIDEGNNKRLISLGMGDPSVYTCFHTSHVATESVVDAVESNKYNGYAPTSGLPQARKAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSILARPGANILIPNPGFPIYQLSASFRGLEVRYYDLLPEKGWEADLDAIKALADQNTVALVIINPNNPCGSVYSYQHLKKTAETARKLSIPVIADEVYGHLAFGGNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVITDPSCLFITPKIVERLKKYFDILGGPATFIQAAVPRIMEQTDGTFFKKTINILKQASDICLEKIQEIPCITCPHKPEGSMAVMVKLNLSLLEDINDDIDFCFKLAKEESVIILPGVAVGLKNWLRITFAADPSFLEEGLERIKSFYHRHSNIQHSN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0211 422 PIRSF Tyr_transaminase 1 422 IPR005958 GO:0006520|GO:0008483|GO:0030170
Vvi19g0211 422 SUPERFAMILY PLP-dependent transferases 34 414 IPR015424 -
Vvi19g0211 422 Gene3D - 63 308 IPR015421 GO:0003824
Vvi19g0211 422 FunFam Tyrosine aminotransferase 292 412 - -
Vvi19g0211 422 Pfam Aminotransferase class I and II 44 408 IPR004839 GO:0009058|GO:0030170
Vvi19g0211 422 PANTHER TYROSINE AMINOTRANSFERASE 5 417 - -
Vvi19g0211 422 Gene3D Aspartate Aminotransferase, domain 1 46 411 IPR015422 GO:0003824
Vvi19g0211 422 CDD AAT_like 45 409 - -
Vvi19g0211 422 FunFam tyrosine aminotransferase 63 308 - -
Vvi19g0211 422 NCBIfam tyrosine/nicotianamine family aminotransferase 8 415 IPR005958 GO:0006520|GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0211 Vvi-Chr19 2309210 2312994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0211 K00815 - vvi:100241782 855.129