Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0208 ATGGACTCCGATCACTGGTCGTCGCGTCTTGCGGTTGCGAAGAGGCAGTTCATGCTTCATCAAACCAACAAATCTCATTCAGATCGGTTGTTCATCGATGATTTGGAGGTGGAAGACGATATTCCGTGCCCGTATTGTTACGAAGATCACGATATCGCCTCGCTGTGCTCGCATCTCGAGGATGAACATTCTTTCGAATCCAGAGTCGCCGTTTGTCCAATTTGCTCTGTTAAGATTGCAAGAGACATGCTAGGTCATATAACAATGCAACACAGGCACTTGTTTAAGTTGCAGAGGCGTCGTAGATTACGCAGAGTTGCTATTCCAAACAGCCAAGCTCTGTCCCTTTTGGGACGGGATCTCCGTGAGGCTCACCTGCAGCCGAAGAGATTACAAAATCTGTGGTTCCTGACCTCGAAGATATTTCTGGAGCAAATTCATCAAAGAAAACCTGGAATACAAGTGTCTATTCTTCCTTAA 480 0.4625 MDSDHWSSRLAVAKRQFMLHQTNKSHSDRLFIDDLEVEDDIPCPYCYEDHDIASLCSHLEDEHSFESRVAVCPICSVKIARDMLGHITMQHRHLFKLQRRRRLRRVAIPNSQALSLLGRDLREAHLQPKRLQNLWFLTSKIFLEQIHQRKPGIQVSILP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0208 159 PANTHER PROTEIN DEHYDRATION-INDUCED 19 33 127 IPR033347 -
Vvi19g0208 159 Pfam Drought induced 19 protein (Di19), zinc-binding 40 92 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0208 Vvi-Chr19 2297446 2302773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0208 - - vvi:100250464 239.58