Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0201 ATGGCATTTTATAGGGTTTCTCCGTTTCGCTACGGTTCTCTCTCGTCTCTCATTCCCTATGTTTCATCTCCTTCCTCTCTCTCCCCTCCAGTTCGTACATTTACCCTCTCCGCTTCCATTTCTACTCCTCACCCATCCCCTCCTTCGCTCCTCACTGCTTCTCCCAAGGCCAGCGATCGCTGGAGGCCCATGTGTTTGTACTACACGCAAGGTAAGTGTACAAAGATGGATGACCCTACGCACCTAGAGACATTCAATCACAATTGCTCCAGGGAGCTTCAAGTAAATGCAGCAAATTTTCAACATTTGCAGTCCCAGCATTTAGATTTTTTCCTGGTGCTTGATTTGGAGGGAAAAATTGAGATTCTTGAATTTCCTGTTCTGATGATTAATGCAAAAACAATGGATGTCGTGGATTTGTTCCACAGGTTTGTGAGGCCTTCAGAAATGTCTGAGCAAAGAATAAATGAATATATTGAAGGAAAATATGGAAAATTAGGGGTTGATCGTGTTTGGCATGATACATCAATCCCATTCAAGGAAGTCATTCAACAATTTGAAGCTTGGCTGACTCAGCATCACTTGTGGACAAAGGAGATGGGTGGACGTCTGGACCAAGCTGCTTTTGTCACTTGTGGGAACTGGGACTTGAAAACAAAAGTCCCTCAGCAATGCAAAGTATCGAAGATGAAGCTTCCCCCATACTTTATGGAGTGGATCAACTTGAAGGATGTTTACCTAAACTTTTACAAGCGGAGGGCCACAGGAATGATGACAATGATGAAGGAACTACAGATACCGCTCTTGGGAAGTCACCACCTTGGAATTGATGACACAAAGAACATAGCAAGAGTATTACAACGCATGTTGGCTGATGGTGCACTCTTGCAGATTACTGCAAGGAGGAATGCTGATTCTCCTGAAAATGTTGAATTCCTTTTCAAGAACCGCATAAGGTAG 960 0.4375 MAFYRVSPFRYGSLSSLIPYVSSPSSLSPPVRTFTLSASISTPHPSPPSLLTASPKASDRWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGKIEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLADGALLQITARRNADSPENVEFLFKNRIR* 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0201 319 Gene3D - 99 317 IPR036397 GO:0003676
Vvi19g0201 319 CDD ERI-1_3'hExo_like 111 290 IPR047201 GO:0000175
Vvi19g0201 319 FunFam Uncharacterized exonuclease domain-containing protein At3g15140 99 317 - -
Vvi19g0201 319 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 56 318 - -
Vvi19g0201 319 SUPERFAMILY Ribonuclease H-like 106 293 IPR012337 -
Vvi19g0201 319 Pfam Exonuclease 117 286 IPR013520 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0201 Vvi-Chr19 2252925 2257899 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0201 - - vvi:100248650 612.068