Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0199 ATGGCCATGGCCAAGAGCCCGAAATTGCATATAGCCATGTTCCCATGGTTTGCTTTCGGCCATATGATTCCTTACCTCAATCTCTCCAACGAGCTTGCTGGAAGAGGCCACAAGATCACCTTCATTTTGCCCAGAAAGGCTCAATCTAAGCTACAACACTTGAATTTTCATCCGGCTCTCATCACTTTCCATCCCCTCATCGTCCCTCATGTCGATGGCCTTCCTCCGGGGACTGAAACTGCCTCTGATATCCCCGTTTCCTTGACTTACCTTCTCGCCACTGCCCTGGACCGCACCAGGGACCAAGTTGAAGCAGCTCTACGTACTTTGAATCCTGATCTTTTGTTCTACGATTTTGCCTATTGGGCACCTGCTTTGGCATCCCAACTAGGGATTAAGTCCATATACTACTGTGTAGTTTGTGCAGCAGCCGTTGCCCACACACCTATCCCTGCTCAACAAGGTAGCAAAGACTGCAGGCAATTGACAGATGTGCCGCCCCCTGGTTACCCCTCCTCAACGGTGGTGCTCCGCCCACATGAGGCTCGGTTGATGGACTTCATGTTTGCACCGTATGGGGAAGGCATCACCTTCCAGCAGCGTCACATCACTGCCAGGACAAGCTGTGATGCAATCTCTATAAGAACATGTCAAGAAACCGAAGGACCCATTTGTGACTACATTGGAAGCCAGTATGGAAAACCGGTGTTCCTAACTGGCCCAGTACTACCCAATCCTTCAGTGGAGCCATTGGAGGATCGGTGGGCGCAGTGGCTCGGTGGGTTCAAGCCTGGTTCAGTTATATTCTGTGCATTTGGAAGCCAAAATGTCCATGAAAAGGACCAGTTCCAAGAACTACTCCTGGGGTTAGAGCTAACAGGCCTGCCATTCTTCGCAGCTCTAAAACCACCGACAGGAGCTGCCACCATTGAAGAGGCCTTACCCGAGGGGTTCCAAGAGAGGGTTGGAGGGAGGGGATTGGTTCATGGAGGGTGGTGGGTGCAGCAGCCGTCAGTACTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGCTATGGATCAATGTGGGAGTCCTTGACCAGCGACCCTCAAATAGTGCTGGTACCGGAACTCCCTGACCAAATATTGAACAGCAGGCTATTGGCTGAAGAGCTTAAAGTTGCAGTGGAGGTTGAGAGGGAAGAAAATGGGTTGTTTTCAAAGGAAAGCTTGTGCGATGCCATTAAAACGGTGATGGATGAAAACAGTGAGGTGGGTGGTCTGGTGAAGAAGAACCATGCTAAGTGGAAGGAGGCCTTGACGAGCCAAAGCTTTCTGAGCAATTATGTTGACAATTTTGTTGGGCAATTGCAGGGACTTTTTGATCAAAAATGA 1380 0.5051 MAMAKSPKLHIAMFPWFAFGHMIPYLNLSNELAGRGHKITFILPRKAQSKLQHLNFHPALITFHPLIVPHVDGLPPGTETASDIPVSLTYLLATALDRTRDQVEAALRTLNPDLLFYDFAYWAPALASQLGIKSIYYCVVCAAAVAHTPIPAQQGSKDCRQLTDVPPPGYPSSTVVLRPHEARLMDFMFAPYGEGITFQQRHITARTSCDAISIRTCQETEGPICDYIGSQYGKPVFLTGPVLPNPSVEPLEDRWAQWLGGFKPGSVIFCAFGSQNVHEKDQFQELLLGLELTGLPFFAALKPPTGAATIEEALPEGFQERVGGRGLVHGGWWVQQPSVLSHPSVGCFVSHCGYGSMWESLTSDPQIVLVPELPDQILNSRLLAEELKVAVEVEREENGLFSKESLCDAIKTVMDENSEVGGLVKKNHAKWKEALTSQSFLSNYVDNFVGQLQGLFDQK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0199 459 Gene3D Glycogen Phosphorylase B; 3 257 - -
Vvi19g0199 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 333 418 IPR002213 GO:0008194
Vvi19g0199 459 Gene3D Glycogen Phosphorylase B; 258 438 - -
Vvi19g0199 459 PANTHER GLYCOSYLTRANSFERASE 9 449 - -
Vvi19g0199 459 FunFam Glycosyltransferase 255 437 - -
Vvi19g0199 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 439 - -
Vvi19g0199 459 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Vvi19g0199 459 CDD GT1_Gtf-like 9 435 IPR002213 GO:0008194
Vvi19g0199 459 FunFam Glycosyltransferase 5 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0199 Vvi-Chr19 2231065 2232444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0199 8 457 Glycosyltransferase AT5G53990 58.537 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0199 - K17193 vvi:100260618 926.006