Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0198 ATGGCGATGGTCAGGAGCCCAAAATTGCATATAGCCATGTACCCATGGTTTGCTTTTGGTCATATGATTCCCTACCTCCATCTCTCCAACGAGCTCGTTGAAAGAGGCCACAGCATCACCTTCATCTTGCCCAAAAAGGTTCAATCTCAGCTACAGCACTTGAATCTTCATCCTACTCTCATCTCTTTCCATCCCCTCACCATCCTCCATGTTGATGGGCTCCCTCCCAGCGCTGAAACTGCTTCCGATGTGCCCATCTCCTTGCATCACCTTCTCGCCGCCGCCATGGACCGCACCACTGACCAAGTTGAAGCAGCCCTACGTGCCTTGAAGCCGGACTTTTTGTTCTATGATATGGCCTATTAG 366 0.5082 MAMVRSPKLHIAMYPWFAFGHMIPYLHLSNELVERGHSITFILPKKVQSQLQHLNLHPTLISFHPLTILHVDGLPPSAETASDVPISLHHLLAAAMDRTTDQVEAALRALKPDFLFYDMAY* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0198 121 PANTHER GLYCOSYLTRANSFERASE 9 120 - -
Vvi19g0198 121 Gene3D Glycogen Phosphorylase B; 2 121 - -
Vvi19g0198 121 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0198 Vvi-Chr19 2219868 2220233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0198 6 121 Glycosyltransferase AT2G22930 62.931 9.25e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0198 - K17193 vri:117908577 239.58