Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0197 ATGGCTTCTCAAAGCATGAACCAAGCTACCAGCAATCCTGGTATTTCTCTTCAATTGTCTGCCATCAAACCTCTTACTGGAAATAATTTTGAAGAATGGTTTGAGTCCTTTAACGTGCATATGACTCTGCAAAATCTGGACTTGGCTTTGAGGGTTGATGAGCCAAGTAAGCTCACTAATGTGAGCTCTGCAGATGAAAGATTATTTTATGAAAGATGGGAGCACTCCAACAGGAGTTGTTTGATGGTGATGAAATACACTATGGATAAATCTATCAAAGAATGCGGGCCAAAGACGGAAAGGGCCAAAGACTTCTTGGAATATGTGAAGGCCAATTATACCAAAGTTGATAAGGCTGAAATGGCAACTCATTTGAAGCTTCTCACAACTACTGTATATGATGGAGTTAGTGGGGTTAGGGATCATATCATCAAGCTAAGGCACTACTTCAACAAGGCAAATGAGATGAAAGTGGAGTTGGGTGAAAAATTTCTGAAATGGTTGATACTGGAGTCTCTTCCTGTTTCCTTTGATGCAGTGAAGTTGACTTACAATGCCTTGAAGGAAGAATGGACTCTGGAGGAGTTGATGTCCATTGTAGTGCAACATGAAGTCTCACTGAAGAAAAATGAGACTCACTCCCTTGCTCTTGTAACAAATCAAGCCAGTAATGTGATGAAAAAACCTCCACACAAGAATTTTGGAGGCTCTAAGCAGTTCAAGAGGAAAGGGAATTCAAATCAAGGAACCTCCAACACATCTGTTTCTTCTAATGCTGCAAAGAGTGAGAAATTCAAGGGGAAGTGCAACTTTTGCCATAAGATTGGCCACAAGCAAGTTGATTGCTTCAAATTTAAAAATTGGCTAGAGAAGAAAAAGAAAGGTGAAATTGTGGTTGTGGTTAATTTGAATGCAAACATGATTGAGACAAATATTGTTGATGTTCATGCCAATTCTTGGTGGTTAGATACTGGTGCCACTATTCATGTCACTAATTCTTTGTAG 1005 0.394 MASQSMNQATSNPGISLQLSAIKPLTGNNFEEWFESFNVHMTLQNLDLALRVDEPSKLTNVSSADERLFYERWEHSNRSCLMVMKYTMDKSIKECGPKTERAKDFLEYVKANYTKVDKAEMATHLKLLTTTVYDGVSGVRDHIIKLRHYFNKANEMKVELGEKFLKWLILESLPVSFDAVKLTYNALKEEWTLEELMSIVVQHEVSLKKNETHSLALVTNQASNVMKKPPHKNFGGSKQFKRKGNSNQGTSNTSVSSNAAKSEKFKGKCNFCHKIGHKQVDCFKFKNWLEKKKKGEIVVVVNLNANMIETNIVDVHANSWWLDTGATIHVTNSL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0197 334 PANTHER OS04G0629600 PROTEIN 27 251 - -
Vvi19g0197 334 MobiDBLite consensus disorder prediction 239 259 - -
Vvi19g0197 334 MobiDBLite consensus disorder prediction 226 259 - -
Vvi19g0197 334 Pfam gag-polypeptide of LTR copia-type 73 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0197 Vvi-Chr19 2211413 2213613 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0197 - - vvi:104879493 469.544