Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0196 ATGGCCAAGAGCCCGAAATTGCATATAGCCATGTTCCCATGGTTTGCTTTCGGCCATATGATTCCTTACCTCAATCTCTCCAACGAGCTTGCTGGAAGAGGCCACAAGATCACCTTCATTTTGCCCAGAAAGGCTCAATCTAAGCTACAACACTTGAATTTTCATCCGGCTCTCATCACTTTCCATCCCCTCATCGTCCCTCATGTCGATGGCCTTCCTCCGGGGACTGAAACTGCCTCTGATATCCCCGTTTCCTTGACTTACCTTCTCGCCACTGCCCTGGACCGCACCAGGGACCAAGTTGAAGCAGCTCTACGTACTTTGAATCCTCATCTTTTGTTCTACGATTTTGCCTATTGGGCACCTGCTTTGGCATCCCAACTAGGGATTAAGTCCATATACTACAGTGCAGTTTGTGCAGCAGCCGTTGCCCACATACCTATCCCAGCTCAACAAGGTAGCAAAGACTGCAGGCAATTGACAGATGTGCCGCCCCCTGGTTACCCCTCCTCAACGGTTGTGCTCCGCCCACATGAGGCTCGGTTGATGGACTTCATGTTTGCACCATATGGAGAAGGCATCACCTTCCAGCAGCGCGTCACCACTGCCCGGGCACGCGGTGATGCAATCTCTATAAGAACATGTCAAGAAACCGATGGACCCATTTGTGACTACATTGGAAGCCAGTATGGAAAACCAGTGTTCCTAACTGGCCCAGTACTACCCAAACCTTCAGTGGAGCCATTGGAGGATCGGTGGGCGCAGTGGCTGGGTGGGTTCAAGCCTGGTTCAGTTATATTCTGTGCATTTGGAAGCCAAAATGTCCATGAAAAGGACCAGTTCCAAGAACTACTCCTGGGGTTAGAGCTAACAGGCCTGCCATTCTTCGCAGCTGTAAAACCACGGACAGGAGTTGCCACCATTGAAGAGGCCTTACCCGAGGGGTTCCAAGAGAGGGTTGGAGGGAGGGGATTGGTTCATGGAGGGTGGTGGGTGCAGCAGCCGTCAGTACTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGCTATGGATCAATGTGGGAGTCCTTGACCAGCGACCCTCAAATAGTGCTGGTACCGGAACTAGCTGATCAAATATTGAACAGCAGGCTATTGGCTGAAGAGCTTAAAGTTGCAGTGGAGGTTGAGAGGGAAGAAAATGGGTTGTTTTCAAAGGAAAGCTTGTGCGATGCCATTAAATCGGTGATGGATGAAAACAGTGAGGTGGGTGGTCTGGTGAAGAAGAACCATGCTAAGTGGAAGGTGATGAGAATTCAATTGCATAGAATACATGTTGACAATTAA 1332 0.503 MAKSPKLHIAMFPWFAFGHMIPYLNLSNELAGRGHKITFILPRKAQSKLQHLNFHPALITFHPLIVPHVDGLPPGTETASDIPVSLTYLLATALDRTRDQVEAALRTLNPHLLFYDFAYWAPALASQLGIKSIYYSAVCAAAVAHIPIPAQQGSKDCRQLTDVPPPGYPSSTVVLRPHEARLMDFMFAPYGEGITFQQRVTTARARGDAISIRTCQETDGPICDYIGSQYGKPVFLTGPVLPKPSVEPLEDRWAQWLGGFKPGSVIFCAFGSQNVHEKDQFQELLLGLELTGLPFFAAVKPRTGVATIEEALPEGFQERVGGRGLVHGGWWVQQPSVLSHPSVGCFVSHCGYGSMWESLTSDPQIVLVPELADQILNSRLLAEELKVAVEVEREENGLFSKESLCDAIKSVMDENSEVGGLVKKNHAKWKVMRIQLHRIHVDN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0196 443 PANTHER GLYCOSYLTRANSFERASE 7 430 - -
Vvi19g0196 443 CDD GT1_Gtf-like 7 416 IPR002213 GO:0008194
Vvi19g0196 443 FunFam Glycosyltransferase 3 252 - -
Vvi19g0196 443 Gene3D Glycogen Phosphorylase B; 5 247 - -
Vvi19g0196 443 Gene3D Glycogen Phosphorylase B; 248 433 - -
Vvi19g0196 443 ProSitePatterns UDP-glycosyltransferases signature. 331 374 IPR035595 -
Vvi19g0196 443 FunFam Glycosyltransferase 253 435 - -
Vvi19g0196 443 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 432 - -
Vvi19g0196 443 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 416 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0196 Vvi-Chr19 2206227 2207558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0196 6 430 Glycosyltransferase AT5G53990 58.920 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0196 - K17193 vvi:100267548 870.152