Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0195 ATGAAGTCAATATTCTACAGTGCAGTTTCTGCATCAGCCTTTTCCTACTGCCTTGTCCTGGATCAACAAATTAGCAAAAGCCGGCCAATTCCAACTGGGCCTCCTCCTGGTTACCCCTCCTCAACGGTGGTGCTCCGCCCCCATGAAGCTCGTTTGCTTCAATTCTTGTTATTTCCATTTGGGGAAGACATCACCTTCCACGAGCGCCTCACCGCCGCCATCAAACTCTGTGATGTAGTCTCTATAAGAACATGCCAAGAAATCGAAGGACCATTTTGTGACTACATAGAAAGACGGTTTGGAAAACCAGTGTTTGTAACGGGCCCCGTTTTGGTTGAACCTTCACCGTTGGCACCGGAGGACAGGTGGGCTCAGTGGCTAAGTGGGTTCAAGCCTGGTTCAGTAATCTTCTGTGCATTTGGGAGCCAAAATTTCCCCGGAAAGGACCAGTTCCAAGAATTACTCCTGGGGTTTGAGCTAACAGGCCTGCCGTTCCTAGCAGCTCTAAAACCACCATTAGGAGCTGCAACCATTGAAGAGGCCTTGCCGGAGGGGTTCCAAGAGAGGGTTGGAGGGAGAGGAGTGGTTTATGGAGGGTGGGTGCCGCAGCCCTCAATCCTGAGCCATCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGCTTTGGATCAATGTGGGAGTCCTTGATGAGTGACCCCCAGATAGTGCTGGTACCAGAGCTTTTTGACCAAACCTTCAACGCTAGGCTATTGGCTGAAGAGCTTAAGGTTGCAGTGGAGGTTGAGAAGGAAGAAAATGGGTGGGTTTCAAAGGAGGGTTTGTGCAAAGCAATTAAGTCAGTAATGGATGAAGAGGGTGAGGTGGGTTGTTTGGTGAAGAAGAATCATGCAAAGTGGAAAGAGACCCTGATGAGCCAAGGCTTTATGAGCAATTACATTGATAATTTTGTTCGCCAACTTTTAGATCTCAAGTGA 972 0.4907 MKSIFYSAVSASAFSYCLVLDQQISKSRPIPTGPPPGYPSSTVVLRPHEARLLQFLLFPFGEDITFHERLTAAIKLCDVVSIRTCQEIEGPFCDYIERRFGKPVFVTGPVLVEPSPLAPEDRWAQWLSGFKPGSVIFCAFGSQNFPGKDQFQELLLGFELTGLPFLAALKPPLGAATIEEALPEGFQERVGGRGVVYGGWVPQPSILSHPSVGCFVSHCGFGSMWESLMSDPQIVLVPELFDQTFNARLLAEELKVAVEVEKEENGWVSKEGLCKAIKSVMDEEGEVGCLVKKNHAKWKETLMSQGFMSNYIDNFVRQLLDLK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0195 323 ProSitePatterns UDP-glycosyltransferases signature. 200 243 IPR035595 -
Vvi19g0195 323 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 199 284 IPR002213 GO:0008194
Vvi19g0195 323 FunFam Glycosyltransferase 122 304 - -
Vvi19g0195 323 PANTHER GLYCOSYLTRANSFERASE 3 318 - -
Vvi19g0195 323 Gene3D Glycogen Phosphorylase B; 121 302 - -
Vvi19g0195 323 Coils Coil 316 323 - -
Vvi19g0195 323 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 43 313 - -
Vvi19g0195 323 CDD GT1_Gtf-like 38 317 IPR002213 GO:0008194
Vvi19g0195 323 Gene3D Glycogen Phosphorylase B; 63 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0195 Vvi-Chr19 2202787 2203758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0195 1 322 Glycosyltransferase AT5G54010 56.656 1.08e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0195 - K17193 vvi:100257275 613.224