Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0194 ATGGCGATGGTCAAGAACCCAAGATTCCATATAGTCATGTATCCATGGTCTGCTTTTGGTCATATGATTCCCTACCTCCATCTCTCTAACGAGCTCGCTGAAAGAGGCCACAGCATCACCTTCATCTTGCCCAAAAAGGTTCAATCTCAGCTACAGCACTTGAATCTTCATCCTACTCTCATCTCTTTCCATTCCCTCACCATCCCCTATGTTGATGGCCTCCCTCCCGGCGCTGAAACTGCTTCCGATGTGCCCATCTCCCTGCATCACCTTCTCGCCACCGCCATGGACCGCACCACTGACCAAGTTGAAGCAGCCCTACGTGCCTTGAAGTCGGACTTTTTGTTCTATGATACAGCCTATTGGGCTCCCCCTTTGGCATCCAAATTAGGTATGAAGCCAATATTCTACAGTGCAGTTAGTGTCGCAGCCATGAGGTTCCGCGCAGTGAGTAGCGTCACATACTGCCTCTCTGCGGCAGTAATCTCGAACACCTTGTTCAAACGAACAAAAGACGTTTTTTCTACCCACTCAACTACGTGGCCCCTCTTGTCCGAACCTGCATTATCAAAAAACCAAAAATAA 585 0.4889 MAMVKNPRFHIVMYPWSAFGHMIPYLHLSNELAERGHSITFILPKKVQSQLQHLNLHPTLISFHSLTIPYVDGLPPGAETASDVPISLHHLLATAMDRTTDQVEAALRALKSDFLFYDTAYWAPPLASKLGMKPIFYSAVSVAAMRFRAVSSVTYCLSAAVISNTLFKRTKDVFSTHSTTWPLLSEPALSKNQK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0194 194 Gene3D Glycogen Phosphorylase B; 4 182 - -
Vvi19g0194 194 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 181 - -
Vvi19g0194 194 PANTHER GLYCOSYLTRANSFERASE 10 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0194 Vvi-Chr19 2195915 2196499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0194 9 145 Glycosyltransferase AT5G53990 60.584 4.04e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0194 - K17193 vvi:109121758 392.504