Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0191 ATGGCCATGGCCAGGAGCACAAAATTGCATATAGCCATGTACCCATGGTTTGCTTTTGGTCATCTGACTCCTTACCTCCATCTCTCCAACGAGCTTGCTGAGAGGGGCCACAAGATCACCTTCATTTTGCCCAAAAAAGCTCAATCCCAGCTGCAGCATCTGAATCTTCATCCTACTCTCATCACTTTTCATCCCCTCACCATCCCACATGTTGATGGCCTCCCTCCCGGTGCTGAAACTGCTTCCGATGTGCCCTTCTTCATGCATCACCTTCTCGTCACCGCCATGGACCGCACCGCTGACCAAGTTGAGGCAGCCCTACGCGCCTTGAAGCCAGACTTTTTGCTCTTTGATTTTCCTTACTGGGCTCCCACTTTGGCTTCCAAACTAGGCATCAAGTCCATATACTACAGTGCAGTTTGTGCAGCAGCCCTTGCCCGCCACCCTGTCCCGGGTGGACAAGTTGGCAAAGACAGGCCAATTACAGCTGGGCCACCCCCTGGTTACCCCTCCTCAACTGTGGTGCTCCGCCCCCATGAAGCTTGGATGGTGAAATTCCTGTATGCACCATTTGGGGAAGGAGTCAACTTGTATCAACGCCTCACCACCGGCATGAAATGCTGTGATGCCATCTCTATAAGAACATGTCATGAAATCGAAGGGGCCTTCTGTGACTACCTTGCAAGCCAGTATGGAAAACCAGTGCTCCTAACAGGCCCCGTATTGCCCAAACCTTTACCCACGCCATCAGAGGACCGGTGGGCGCAGTGGCTGAGTGGGTTTAAGCCTGGTTCAGTAATATTCTGTGCATTTGGAAGCCAAAATTTCCCGGAAAAGGACCAGTTCCAAGAACTACTCCTGGGGTTAGAGCTAACAGGCCTGCCATTCCTAGTAGCTCTAAAACCACCGACAGGAGCTGCCACCATTGAAGAGGCCTTACCGGAGGGGTTCCAAGAGAGGGTCGGAGGGAGAGGAGTGGTTCATGGAGGGTGGGTGCCGCAGCCCTCAATACTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGCTTTGGATCAATGTGGGAGTCCCTGACCAGTGACCCCCAAATAGTGCTGGTACCGGAACTCCCTGACCAAATATTGAACACTAGGCAATTGGCGGAAGTGCTAAAAGTTGCAGTGGAGATTGAGAAGGAAGAAAATGGGTGGTTTTCAAAGAAGAGCTTGTGCAGAGCCGTCAGATCAGTGATGGACGAAGAGAGTGAGGTGGGTGGTTTAGTGAGGAAGAATCATGCTAAGTGGAAGGAGACCTTGACCAGCCAAGGCTTTATGAGCAATTACATTGAGAATTTTGTCCAGCAACTGCAACAACTTTTGGATAAAAAATGA 1374 0.5131 MAMARSTKLHIAMYPWFAFGHLTPYLHLSNELAERGHKITFILPKKAQSQLQHLNLHPTLITFHPLTIPHVDGLPPGAETASDVPFFMHHLLVTAMDRTADQVEAALRALKPDFLLFDFPYWAPTLASKLGIKSIYYSAVCAAALARHPVPGGQVGKDRPITAGPPPGYPSSTVVLRPHEAWMVKFLYAPFGEGVNLYQRLTTGMKCCDAISIRTCHEIEGAFCDYLASQYGKPVLLTGPVLPKPLPTPSEDRWAQWLSGFKPGSVIFCAFGSQNFPEKDQFQELLLGLELTGLPFLVALKPPTGAATIEEALPEGFQERVGGRGVVHGGWVPQPSILSHPSVGCFVSHCGFGSMWESLTSDPQIVLVPELPDQILNTRQLAEVLKVAVEIEKEENGWFSKKSLCRAVRSVMDEESEVGGLVRKNHAKWKETLTSQGFMSNYIENFVQQLQQLLDKK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0191 457 CDD GT1_Gtf-like 9 444 IPR002213 GO:0008194
Vvi19g0191 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 416 IPR002213 GO:0008194
Vvi19g0191 457 FunFam Glycosyltransferase 254 435 - -
Vvi19g0191 457 Gene3D Glycogen Phosphorylase B; 253 436 - -
Vvi19g0191 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 438 - -
Vvi19g0191 457 Coils Coil 443 457 - -
Vvi19g0191 457 ProSitePatterns UDP-glycosyltransferases signature. 331 374 IPR035595 -
Vvi19g0191 457 FunFam Glycosyltransferase 5 253 - -
Vvi19g0191 457 Gene3D Glycogen Phosphorylase B; 4 252 - -
Vvi19g0191 457 PANTHER GLYCOSYLTRANSFERASE 9 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0191 Vvi-Chr19 2155950 2157323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0191 8 455 Glycosyltransferase AT5G53990 60.802 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0191 - K17193 vvi:100267414 928.317