Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0189 ATGGCCATGGCCAGGAACACAAAATTTCAGATAGCCATGTACCCATGGTTTGCTTTTGGTCATCTGACTCCTTACCTCCATCTCTCCAACGAGCTTGCTGAGAGGGGCCACAAGATCACCTTCATTTTGCCCGAAAAGACTCAATCCCAGCTACAGCACCTGAATCTTCATCCTACTCTCATCACTTTCCATCCCCTCACCATCCCCCATGTTGATGGCCTCCCTCCCGGAGCTGAAACTGCTTCCGACGTGCCCTTTTTCTCTCATCACCTTCTCGCCACCGCCATGGACCGCACCTCTGACCAAGTTGAAGCAGCCCTACGTGCCTTGAAGCCAGACTTTTTTTTCTTTGATTTTCCCTATTGGGCTCCGGCTTTGGCTTCCAAGCTAGGCATCAAGTCGATATACTACAGCGCAGTTTGTGCATCGGCCGTTGCCCACCACCCTCCCCCTGGTCGACAAGTTAGCAAAGACAGTACTCTGACTACAGATGTGCCCCCGCCTGGTTACCCCTCCCCAACGGTGGTGCTCCGCTCCCATGAAGCTTGGATGGTGCAATTCCTGTTTGCACCATTCGGGGAAGGCGTCAACTTGTACCAACGCCTCACAACCGGCATGAAAGGCTGCGATGCCATCTCTATAAGAACATGTCAAGAAATCGAAGGACCCTTCTGTGACTACCTTGCAAGCCAGTATGGAAAACCAGTGCTCCTAACAGGCCCCGTATTGCCCAAACCTTTACCCACGCCATTAGAGGACCGGTGGGCTCAGTGGCTGGGTGGGTTCAAGCCTGGTTCAGTAATATTCTGTGCATTTGGAAGCCAAAATTTCCCGGGAAAGGACCAGTTCCAAGAACTGCTCCTGGGGTTAGAGCTAACAGGCCTGCCATTCCTAGTGGCTCTAAAACCACCGACAGGAGCTGCAACCATTGAAGAGGCCTTACCGGAGGGGTTCCAAGAGAGGGTTGGAGGGAGAGGAGTGGTTCATGGAGGGTGGGTGCCGCAGCCGTCAATATTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGCTTTGGATCAATGTGGGAGTCCTTGACCAGTGACCCCCAAATAGTGCTGGTACCGGAACTCCCTGACCAAATATTGAACACTAGGCTATTGGCGGAAGTGCTAAAAGTTGCAGTGGAGATTGATAAGGAACAAAATGGGTGGTTTTCAAAGGAGAGCTTGTGCAGAGCCATCAGATCAGTGATGGATGAAGAGAGTGAGGTGGGTGGTTTAGTGAGGAAGAATCATGCTAAGTGGAAGAAGACCTTGACAGGCCAGGGCTTTATGAGCAATTACATAGATAATTTTGTCCAGCAACTGCAACAACTTTTGGATAAAAAATGA 1377 0.512 MAMARNTKFQIAMYPWFAFGHLTPYLHLSNELAERGHKITFILPEKTQSQLQHLNLHPTLITFHPLTIPHVDGLPPGAETASDVPFFSHHLLATAMDRTSDQVEAALRALKPDFFFFDFPYWAPALASKLGIKSIYYSAVCASAVAHHPPPGRQVSKDSTLTTDVPPPGYPSPTVVLRSHEAWMVQFLFAPFGEGVNLYQRLTTGMKGCDAISIRTCQEIEGPFCDYLASQYGKPVLLTGPVLPKPLPTPLEDRWAQWLGGFKPGSVIFCAFGSQNFPGKDQFQELLLGLELTGLPFLVALKPPTGAATIEEALPEGFQERVGGRGVVHGGWVPQPSILSHPSVGCFVSHCGFGSMWESLTSDPQIVLVPELPDQILNTRLLAEVLKVAVEIDKEQNGWFSKESLCRAIRSVMDEESEVGGLVRKNHAKWKKTLTGQGFMSNYIDNFVQQLQQLLDKK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0189 458 FunFam Glycosyltransferase 5 254 - -
Vvi19g0189 458 CDD GT1_Gtf-like 11 445 IPR002213 GO:0008194
Vvi19g0189 458 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Vvi19g0189 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 332 417 IPR002213 GO:0008194
Vvi19g0189 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 439 - -
Vvi19g0189 458 Gene3D Glycogen Phosphorylase B; 3 250 - -
Vvi19g0189 458 PANTHER GLYCOSYLTRANSFERASE 10 450 - -
Vvi19g0189 458 Gene3D Glycogen Phosphorylase B; 254 436 - -
Vvi19g0189 458 FunFam Glycosyltransferase 255 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0189 Vvi-Chr19 2134035 2135411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0189 8 456 Glycosyltransferase AT5G53990 60.444 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0189 - K17193 vvi:100262255 932.554