Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0188 ATGGCGTTGGAGGAGCGGTGGGCGCGGTGGCTAGGCGGGTTCAAGCCTGGTTCAGTAATATTCTGTGCATTTGGGAGCCAAAATTTCCCCGAAAAGGACCAGTTCCAAGAACTACTCTTGGGGTTTGAGCAAACAGGCCTGCCCTTCCTAGCAGCTCTAAAACCACCACTAGGAGCTGCAACCATTGAAGAGGCCTTGCCGGAGGGGTTCCAAGAGAGGGTTGGAGGGAGAGGAGTGGTTCATGAAGGGTGGGTGCCTCAGCCCTCAATCCTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGTGGGTTTGGATCAATGTGGGAGTCCTTGATGAGTGACCCCCAGTTAGTGCTGGTACCAGAGCTTTCTGACCAAACCTTCAACGCTAGGCTATTGGCAGAAGAGCTTAAGGTTGCAGTGGAGATTGAGAGGGAAGAAAATGGGTGGGTTTCAAAGGAGAGTTTGTGCAAAGCCATTAAGTCAGTACTAGATGAGGAGAGTGAGGTGGGTTGTTTGGTGAAGAAGAATCATGCAAAGTGGAAAGAGACCCTGATGAGCCAAGGCTTTATGAGCAATTACATTGATAATTTTGTTCGCCAACTTTTAGATCTCAAGTGA 624 0.5016 MALEERWARWLGGFKPGSVIFCAFGSQNFPEKDQFQELLLGFEQTGLPFLAALKPPLGAATIEEALPEGFQERVGGRGVVHEGWVPQPSILSHPSVGCFVSHCGFGSMWESLMSDPQLVLVPELSDQTFNARLLAEELKVAVEIEREENGWVSKESLCKAIKSVLDEESEVGCLVKKNHAKWKETLMSQGFMSNYIDNFVRQLLDLK* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0188 207 PANTHER GLYCOSYLTRANSFERASE 5 202 - -
Vvi19g0188 207 CDD GT1_Gtf-like 10 201 IPR002213 GO:0008194
Vvi19g0188 207 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 83 169 IPR002213 GO:0008194
Vvi19g0188 207 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 199 - -
Vvi19g0188 207 ProSitePatterns UDP-glycosyltransferases signature. 84 127 IPR035595 -
Vvi19g0188 207 Gene3D Glycogen Phosphorylase B; 6 186 - -
Vvi19g0188 207 FunFam Glycosyltransferase 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0188 Vvi-Chr19 2131717 2132340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0188 3 206 Glycosyltransferase AT4G27570 67.647 6.07e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0188 - K17193 vri:117908577 392.504