Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0187 ATGGCCATGCCCAAAAGCCCAAAATTTCATGTAGCCATGTTCCCATGGTTTGCCTTCGGCCATATGACTGCATTCCTCCATCTCTCCAACAAGCTTGCTGAGAGAGGCCATAAAATCACATTCATGCTGCCCAAAAAGGCTCAATCCCAGCTACAAACCTTGAATTTTCATCCTACTCTCATCTCTTTCCATCCCCTCTCCATCCCCCATGTTGATGGCCTTCCTCCCGGGGCTGAAACCGCCTCTGATATCCCCATCTTCTTGACCCACCTTCTGGCCACTGCCATGGACCGCGCCACCGACCAACTTGAAGCAGCTCTCCGGGCATCGAATCCTGACTTTTTGTTCTATGATTGTAGCCATTTGGCTCCGGTTTTGGCATCGAGATTAGGCATCAAGGCCATATGCTACAATGTGGTTTGCGCAGCTTCCATTGCCATTGCCCTTGTCCCAGCTCGTGGAGTTAGCAAGGACAGGCCAGTTACAGAGGCTGAACTGGCTGTGCCGCCATCTGGGTACCCTTCTTCGACGGCGGTGTTCCGCCGCCATGAAGGTCGGGCTTTGCAGTTCATATCTGCACCGTTTGGGGACGGCATAAGCTTCTACGAACGCACCACCACTGCCATGAAAGAATCCGATGCAATTTCTATAAGAACCTGTAGAGAAATTGAAGGAAACTTGTGTGACTACATTGGAACCCAGTATGGAAAACCAATCTTCCTAACCGGCCCGGTACTGCCTGAGCCTTCACCGACCCCACTGGAGGACAGGTGGGCTCAGTGGCTAGGTGGGTTCAAGCCCGGCTCGATAATATTCTGCGCATTTGGAAGCCAATACATCCTTGAAAAGGACCAGTTCCAGGAACTGGTTCTAGGGTTAGAGCTAACAGGCCTGCCATTCCTAGTAGCTCTAAAGCCACCAACCGGAGCTGCAACCATTGAAGAGGCCTTACCAGAAGGGTTCAAAGAAAGGGTTGGAGGGAGAGCAGCGGTTCATGGAGGGTGGGTGCAACAGCCATCAATCCTGAGCCACCCATCAGTGGGGTGTTTTGTGAGCCACTGCGGGTTTGGATCAATGTGGGAGTCCCTCATGAATGACTGCCAAATAGTGCTGGTACCCCATCTTGGTGACCAAATATTGAACACTAGGGTTTTGGCTGGAGAGCTTCAGGTTGCAGTGGAAGTTGAGAGGGAAGAGAATGGGTGGTTTTCAAAGGAGAGCTTGTGCAAAGCCATTAAATCAGTGATGGATGAAGAGAGTGAGGTGGGTGGTTTGGTGAGGAAGAATCATGCTAAGTGGAAGGAGACCTTCGCGAGGCCAGGCTTTATGAGCAATTATGTTGATAAATTTGTTGGCCAATTGCAAGGACTTTTGGACCATAATTGA 1386 0.5072 MAMPKSPKFHVAMFPWFAFGHMTAFLHLSNKLAERGHKITFMLPKKAQSQLQTLNFHPTLISFHPLSIPHVDGLPPGAETASDIPIFLTHLLATAMDRATDQLEAALRASNPDFLFYDCSHLAPVLASRLGIKAICYNVVCAASIAIALVPARGVSKDRPVTEAELAVPPSGYPSSTAVFRRHEGRALQFISAPFGDGISFYERTTTAMKESDAISIRTCREIEGNLCDYIGTQYGKPIFLTGPVLPEPSPTPLEDRWAQWLGGFKPGSIIFCAFGSQYILEKDQFQELVLGLELTGLPFLVALKPPTGAATIEEALPEGFKERVGGRAAVHGGWVQQPSILSHPSVGCFVSHCGFGSMWESLMNDCQIVLVPHLGDQILNTRVLAGELQVAVEVEREENGWFSKESLCKAIKSVMDEESEVGGLVRKNHAKWKETFARPGFMSNYVDKFVGQLQGLLDHN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0187 461 FunFam Glycosyltransferase 258 439 - -
Vvi19g0187 461 FunFam Glycosyltransferase 5 257 - -
Vvi19g0187 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 441 - -
Vvi19g0187 461 PANTHER GLYCOSYLTRANSFERASE 10 452 - -
Vvi19g0187 461 Gene3D Glycogen Phosphorylase B; 4 256 - -
Vvi19g0187 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 330 420 IPR002213 GO:0008194
Vvi19g0187 461 ProSitePatterns UDP-glycosyltransferases signature. 335 378 IPR035595 -
Vvi19g0187 461 CDD GT1_Gtf-like 10 439 IPR002213 GO:0008194
Vvi19g0187 461 Gene3D Glycogen Phosphorylase B; 257 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0187 Vvi-Chr19 2128632 2130017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0187 8 460 Glycosyltransferase AT5G54010 59.471 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0187 - K17193 vvi:100245127 942.954