Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0171 ATGGCAGTCGCTTCCGATGACTCCACCGACGTCGAGAAGCTCTACCAGTACGGCGAGAATCTGAACGAGTCGCAGGACAAGTCTCAGAATTTGAAGGACTATGAGGGCATAATCGAGGCTGCCAAAGGTAGCATTAAGGCAAAGCAATTGGCAGCGCAGCTTATTCCCAGGTTCTTCAAGTACTTTCCGAGCTTGTCCGAAAGAGCGATCTTTGCCCATTTTGATTTGTGCGAGGAGGAGGAACTTGGGGTCCGGGTTCAAGCAATCCGAGGACTTCCACTATTTTGCAAGGATACTCCAGAATATGTGTCTAAAATTGTTGACATTCTTGGACAGCTCCTTACAGCTGGAGAAAATGTTGAACGTGATGCGGTTCATAAAGCCCTTTTATCTCTGTTGCGTCAGGATGTAAAGGCCTCTTTAACATCTCTGTTTAAGCATATTGGGAGCTCTGAAGAACCCTGCACTGATGAAATCATTCGTGAAAAGGTTCTATGCTTTGTCAGAGATAAGGTGTTTCCTCTTAAAGCAGAACTGTTGAAGCCACAGGAGCAAATGGAGAGGCATATAACTGATTTGGTGAAAAAAAGTTTGCAAGATGTAACTGGGGCAGAATTTAAACTGTTCATGGACTTCTTGAGAAGCTTGAGCTTGTTTGGACAGAAGGCTCCTGCAGAGCGTGTACAAGAACTGATTGAAATCATTGAAGAACAGGCTGATCTAGATGCTCAATTCGATGTTTCAGATGGTGATCATATTGACAGACTAATATCTTGTCTATACATGGCTCTTCCTCTTTTTAAGAGAGGTGCATCAAACAGCAAGTTCCTCAACTACTTGAACAAACACATAATACCTGTTTTCGATAAGATTCCTGAAGAACGAAAATTGGACTTGCTCAAGAACCTTGCAGAATTTTCACCCTATGCAACACCACAGGATTCTCGTCAGCTTCTTCCAGCTGTTGTTCAACTTCTAAAGAAGTACATGCCACGGAGAAGGACTGGAGAAGAGATGAACTTTACTTATGTGGAATGCTTACTTTACACCTTTCACCATTTAGCTTACAAGACTCCTAATGCCACAAATAGTCTTTGTGGCTACAAGATTGTTACTGGCCAACCATCAGATAGGCTTGGGGAGGATTTCTCTGACTATTATAAAGACTTCATGGAGAGGCTGAGTACACTGGAGGATTTATCTAGAGCTACCTCAAAAAAATTGACCCAGGGGATCGCAGAGCATAACAAAGCTATGGCAGCTGCTAAAACTGAAGAAGCAAAGGATATTGTTAAGACTCAAAAACAGAATGCTGCCACTGGGCTCCGGACCTGCAACAACATACTGGCAATGACCCAGCCATTGCATTCAAAATCACCTTCATTTATTGGAGATCAGAAAATCAATTTGTCATGGAAAAAAGCAGCAAAGCCTTCAGCCCCCCCAACTGCTGCATCATCTGGTGGGAAGCGAATCGCTGGTGATGCTAATGGTTCAAGCACAAACGCAAACAAAAGAGGCCGAGCTGCTGGTGGCATGCAAAACCAGCTTGTAAACAAGGCATTAGAGGGTTTATCTCGTGGTGGTGGGAGGACTGGCGGAAGTAGCAGGGCCTGGGGAGGACAACGTGGAAGAGGAAGGGGAAGAGTAAGAGGAACAGGAAGAGGAAGAGGAACAGGAAGAGGTTACCGTTAG 1695 0.4454 MAVASDDSTDVEKLYQYGENLNESQDKSQNLKDYEGIIEAAKGSIKAKQLAAQLIPRFFKYFPSLSERAIFAHFDLCEEEELGVRVQAIRGLPLFCKDTPEYVSKIVDILGQLLTAGENVERDAVHKALLSLLRQDVKASLTSLFKHIGSSEEPCTDEIIREKVLCFVRDKVFPLKAELLKPQEQMERHITDLVKKSLQDVTGAEFKLFMDFLRSLSLFGQKAPAERVQELIEIIEEQADLDAQFDVSDGDHIDRLISCLYMALPLFKRGASNSKFLNYLNKHIIPVFDKIPEERKLDLLKNLAEFSPYATPQDSRQLLPAVVQLLKKYMPRRRTGEEMNFTYVECLLYTFHHLAYKTPNATNSLCGYKIVTGQPSDRLGEDFSDYYKDFMERLSTLEDLSRATSKKLTQGIAEHNKAMAAAKTEEAKDIVKTQKQNAATGLRTCNNILAMTQPLHSKSPSFIGDQKINLSWKKAAKPSAPPTAASSGGKRIAGDANGSSTNANKRGRAAGGMQNQLVNKALEGLSRGGGRTGGSSRAWGGQRGRGRGRVRGTGRGRGTGRGYR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0171 564 PANTHER APOPTOSIS INHIBITOR 5-RELATED 9 557 IPR008383 -
Vvi19g0171 564 SUPERFAMILY ARM repeat 43 361 IPR016024 -
Vvi19g0171 564 MobiDBLite consensus disorder prediction 473 564 - -
Vvi19g0171 564 MobiDBLite consensus disorder prediction 493 509 - -
Vvi19g0171 564 Pfam Apoptosis inhibitory protein 5 (API5) 11 548 IPR008383 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0171 Vvi-Chr19 1953800 1979405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0171 - - vvi:100260610 1024.23