Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0163 ATGGCACAGGAGGAGCAAAACCATAGGTGTAGTGGGAGTAGCAGTGGCGGTGGTGGAGGAGGAGGAGGAGGAGGAAGGCCCAGCAAAAAGCCAAAACAGAAGAAAATCCCACAGAGGGGACTTGGTGTGGCACAGCTTGAGAAAATTAGATTGGAAGAACAAAACAAGAAAAACAGTCCTGCTGCATTTTTCTCAGATTCCTCCACCTTATCCTCATCCAACCCTTCATATTCATCACTCTCACTCCCCAATTACCACCACTCCCACTCTTCCTCATTAATCCCTTTTCCTTCTCCCTCCCCACCCAATCTTCATTCCCCGACCTCTCAATTTAGGCCCCCAAATATAGATGTTGCCCACTCAAACACTGTTCCATTGCCCAACCCAATCTCCAATGGGGGATTTAAGATTGGGTTTTCGCCTTCCATACCAGTCTCTGGCCATGGACATGTTCCCAAATTGTGGAACCATGAGTTAAATCTTGAGGGGGAGAATCCTAGAGTGGATCATGGGCTAGTTTTTCAGCCGCCTTATGAATCAAACCCCATTTGGCCTCTCCCTACTCTGATGCAAAGGGCACAACCATATCAGCAACCTTCTTCTTCAATGGTCAATGTCTCATCAGGAACTTCATCATCACCTATACCAAATTTTCAGATAGAGCCCCCTTCAAACCAAAGCTATTATGGCAACAACTACACATCCATGTGGCCAGAGGAAGAGAAGATGGTTGGGGTGAAGAGGCCATACCCATTCTCTCTGGACAATCCACCAGGCCCCTCTTTCAACTCCAAATTTCCTACCTTTGATGCTCCTATAAGATCAGATGAATCAGCTTCATATGGAAATGGAGGCACATTCATTTTGGATGTCGGAAATGCCATTTTCAGGTCAGCTTTAGGTTTCATCCATTGGCCTTATATTGAAATGGTAAATCATTATAGTTTGTTCATATGGTGTTTGTTTCTTTCAACCTTTCTCAGAGAAGGCCCTTCATGCTCAACTTCATTGTCTGAAATTGAATCAAAGAAAGGCATTAGAGAAAATGGGGGTTCCAATGGGGACTTTCTCACATTGGCACCTCCCTCCATCACTTCACCACACCCAAATACAAGATCAAAGCAGCCTCCTGGTCATCCAGCCTACTACAACAAAGACTCCTCCGAATTCGAGTCCTTGCCCTACCAAGTAAAGCTCAAACAACACAATCCCGCCTTCCATTTCCCAACCCCTTTTCCAACTCCCAATCTCATTATCTCCAATTCTTGTTTTAAGGGAAACACGGGCGACCCAATTAGGCCGCACCCAACAGGGCCACTCCAGCATCAGCAGCAGTGGCAGCAGCTGCCTTTCTACAATTTCCTGCAGCCGGCAAACCCGCAAAATGGCCCAGCAGCAACCAGTTCAAGCAATTGCAATGGTGGGGAAGTAGGAGGAAGTGTTGACCTCAACCTAAAGTTGTAA 1464 0.4645 MAQEEQNHRCSGSSSGGGGGGGGGGRPSKKPKQKKIPQRGLGVAQLEKIRLEEQNKKNSPAAFFSDSSTLSSSNPSYSSLSLPNYHHSHSSSLIPFPSPSPPNLHSPTSQFRPPNIDVAHSNTVPLPNPISNGGFKIGFSPSIPVSGHGHVPKLWNHELNLEGENPRVDHGLVFQPPYESNPIWPLPTLMQRAQPYQQPSSSMVNVSSGTSSSPIPNFQIEPPSNQSYYGNNYTSMWPEEEKMVGVKRPYPFSLDNPPGPSFNSKFPTFDAPIRSDESASYGNGGTFILDVGNAIFRSALGFIHWPYIEMVNHYSLFIWCLFLSTFLREGPSCSTSLSEIESKKGIRENGGSNGDFLTLAPPSITSPHPNTRSKQPPGHPAYYNKDSSEFESLPYQVKLKQHNPAFHFPTPFPTPNLIISNSCFKGNTGDPIRPHPTGPLQHQQQWQQLPFYNFLQPANPQNGPAATSSSNCNGGEVGGSVDLNLKL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0163 487 MobiDBLite consensus disorder prediction 458 487 - -
Vvi19g0163 487 MobiDBLite consensus disorder prediction 1 111 - -
Vvi19g0163 487 MobiDBLite consensus disorder prediction 200 221 - -
Vvi19g0163 487 MobiDBLite consensus disorder prediction 344 385 - -
Vvi19g0163 487 PANTHER OS01G0212500 PROTEIN 1 487 IPR040356 GO:0003700
Vvi19g0163 487 Pfam Plant transcription factor NOZZLE 29 79 IPR014855 GO:0003700
Vvi19g0163 487 MobiDBLite consensus disorder prediction 356 372 - -
Vvi19g0163 487 MobiDBLite consensus disorder prediction 58 94 - -
Vvi19g0163 487 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0163 Vvi-Chr19 1825006 1826845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0163 - - vvi:104877499 739.954