Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0148 ATGCCATTCTTTCATTTGAGATTGTCTGTTCCGGAATGTGTTCCGGGCACCCTTTTGTGGCCGCTGTTTGGCTATGTGGTGGACTGCACACATTTGCAACCAAGCACAATGCAGTCAATTTTTCGGGTTTCTGTCATGAAGAATGTGCCACCCTCTCTTGGGTTTAGTAGTTCCTTCTCAAGACTCCACTCTCTTGGAGCACTGCCAATGAGCATCAATGCAGGAGAAACACTTGATTCTGATGAGTGTGGGGAGTCAAAACTTGGGGCAGATTCATCTAAGAAGCATACTTTGAATGGGGTGGTTCAGTTGGATAGTTATTCCAACTCGGGTGAAATTTATATCAATGATCATTGTAAGGAAAGCCAAAGAAGAAGAAAGATAGGTCTAGCAAACAAAGGTAGAGTTCCATGGAATAAAGGCAGAAAACATAGTGCAGAGACTCGTGAGAAGATCAGACAGAGAACAATACAAGCCTTGAGAGATCCCAAGGTTAGACAGAAGATGTCTGAATGTCCCCGTACTCACAGCGAACAAAGCAAGGCAAAAATACGGTCTTCACTCCGCCGGGTCTGGGGAAAGCGCTTGAAATGGAAACGGTCAAGGGAGAAATTTTATCTGTCATGGGCAGAAAGCATAGCAAAGGCGGCTAAGAAAGGTGGGAGTGACCAAGAAGAACTAGATTGGGATAGCTATGATAAGATAAAAGAAGAGATAGCTCTTCAACAGCTTCAGTGGGCTGAAAACAAGAAAAAGGCAAAGGAACTTGCAAAGATGAGAGCAGAGAGAGCTGCACGGGCCAGAGCAGAAAAGATGGCAATGCTTGCTGAAAAGAGAAGAGAGCGGGAACGGCAAGCAGAAGCAAGAGGAGAAATAAAGAGAGAGACAACTAGGAAATCAAAGGAAGACAAAGAAGAGTTAGCAGTTGCCAAGGGCTTAAAACTCAAAGAGAGATTAACAAAGCTTCACAAGAAGAAATCCATAAATGGTCAAGTTGCAAGTCTAAGGGAGATGGTTATCTCTCAGATCCCAGCTTGTGAGAAATTGGATCTGGAGTTCATAAAAAGAGAGAGAATGCAAAGAGAAGTCTCTCTTGCAGATCAGATTCGTGCTGCCAAGAGCAAAAGGGCACAATCAGCAATGAGGGAAGCTCTGACTGAGCTATCCCCCAGTTACCCGTCCAGTGCAAGATCGAGTTAA 1200 0.4442 MPFFHLRLSVPECVPGTLLWPLFGYVVDCTHLQPSTMQSIFRVSVMKNVPPSLGFSSSFSRLHSLGALPMSINAGETLDSDECGESKLGADSSKKHTLNGVVQLDSYSNSGEIYINDHCKESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRDPKVRQKMSECPRTHSEQSKAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGSDQEELDWDSYDKIKEEIALQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRERERQAEARGEIKRETTRKSKEDKEELAVAKGLKLKERLTKLHKKKSINGQVASLREMVISQIPACEKLDLEFIKRERMQREVSLADQIRAAKSKRAQSAMREALTELSPSYPSSARSS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0148 399 Coils Coil 264 295 - -
Vvi19g0148 399 Pfam NUMOD3 motif 125 153 IPR003611 GO:0003677
Vvi19g0148 399 MobiDBLite consensus disorder prediction 373 399 - -
Vvi19g0148 399 MobiDBLite consensus disorder prediction 275 307 - -
Vvi19g0148 399 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 17 391 - -
Vvi19g0148 399 SMART seet_6 140 156 IPR003611 GO:0003677
Vvi19g0148 399 SMART seet_6 172 188 IPR003611 GO:0003677
Vvi19g0148 399 MobiDBLite consensus disorder prediction 384 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0148 Vvi-Chr19 1647072 1651287 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0148 - - vvi:100264054 696.427