Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0147 ATGAATTGGAGGGCAACTCTGAAAACTTCTCTGTTGATAAAGCCCTACAAAAACCCTCAAAACCCTCATCTCCTCCATCACTTCCTATCTCTGTATCTCAGGGTTTTACAGAAAACCATGGCGACTCTGACTCGGTGTCTGGCTCGGTCGCTGCCCGCTTTCTCCTCTCTCATTTCTCGCTCCACTCCTTCTCTCTCCCTCTCCACCGCCTCTTGTTCCACTTTCTCACTTCTCCGCCTCCGCCCTCTCTCCGCAGCCGCCGTCTCCGTCCTCCGCCACCTCCCTCAATCGACCAGTGCACGGAGCTTTTCCACTCGCCAAACCTCCTCCTCGCTCAATGATCCAAATCCGAACTGGTCCAACCGGCCCCCGAAGGAGACGATCTTGCTCGACGGTTGCGATTTCGAGCACTGGCTTGTGGTGATGGAGAAGCCGGAGGGTGACCCTACCAGAGATGAGATCATTGACAGCTATATCAAAACCCTTGCTATGATTGTCGGAAGTGAGGAAGAAGCAAGGATGAAGATATATTCAGTTTCAACTAGATGCTACTTTGCATTTGGTGCCCTTGTATCAGAAGAGCTTTCCTTGAAGATCAAAGAATTACCTCGAGTCCGTTGGGTTCTTCCAGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGGGAACCTTTTATTGATGGAAAAGCTGTTCCATATGACCCTAAATACCACGAGGAATGGATAAGAAATAATGCTCGAGCAAATGAAAGGAATAGGCGGAATGACAGGCCTCGTAATTTTGATAGATCAAGGAACTTCGAAAGAAGAAGGGAAAATATGCAGAACAGAGATTTTCAAGCTCCTATGCAAAACTCACCTCCCAACATGGGTGGAGGGCCTCCTCCAAACATGGGTGGAGGGCCACCTCCAAACATGGGTGGAGGGCCGCCTCCGAACATGGGCATGGGTGGAGGACCACCGTCGAACAACTTTGGAGGGCCGCAGAACAACTTTCGAGGAGGGCCACCCAACAACTATGGAGGAGCACCACCAAGCAACTATGGAGGGGGAGCGCCACCAAGCAACTATGGAGGGGGAACACCACCAGGCAACTATGGAGGAGGAGCGCCACCAAGCAATTATGGAGGAGGAGCACCACCAAGCAACATTGGGGGAGGAGCGCCACCAAGCAACTATGGGGGAGGTGCGCCACCAAGTAACTATGGGGGAGGAGCCCCACCAAGCAACTATGGGGGAGGAGCACCACCAAACAACTATGGTGGAGGTATGCCACAGAGCAATTTTGGAGGGGGAATGCCACCTAACAACGCTGGGGGGAATGCTTCTCAACAACAATGGTGGAATGCTGATCAGCAACCTGGGAGAAATTCCCAATAG 1383 0.5148 MNWRATLKTSLLIKPYKNPQNPHLLHHFLSLYLRVLQKTMATLTRCLARSLPAFSSLISRSTPSLSLSTASCSTFSLLRLRPLSAAAVSVLRHLPQSTSARSFSTRQTSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAMIVGSEEEARMKIYSVSTRCYFAFGALVSEELSLKIKELPRVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNRDFQAPMQNSPPNMGGGPPPNMGGGPPPNMGGGPPPNMGMGGGPPSNNFGGPQNNFRGGPPNNYGGAPPSNYGGGAPPSNYGGGTPPGNYGGGAPPSNYGGGAPPSNIGGGAPPSNYGGGAPPSNYGGGAPPSNYGGGAPPNNYGGGMPQSNFGGGMPPNNAGGNASQQQWWNADQQPGRNSQ* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0147 460 MobiDBLite consensus disorder prediction 99 123 - -
Vvi19g0147 460 MobiDBLite consensus disorder prediction 289 318 - -
Vvi19g0147 460 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 42 335 IPR039206 GO:0016554
Vvi19g0147 460 MobiDBLite consensus disorder prediction 250 460 - -
Vvi19g0147 460 MobiDBLite consensus disorder prediction 422 460 - -
Vvi19g0147 460 MobiDBLite consensus disorder prediction 250 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0147 Vvi-Chr19 1640874 1644395 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0147 - - vvi:100265808 572.007