Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0144 ATGGCTTTACGCCACCTCACTCCACTGAGTCCACTCTCTCCCTTCACACGCATACCTCCACGACGTTGTTTCACTCAGAAGCCCTTCTCCCTCTCCGTCTCGGCATCCATGGGTTCTTCTTCTCGTAAGGTTTTGGTTCCGATCGCCCACGGCTCGGAGCCGATGGAGGCGGTGATCATCATCGATGTGCTCCGGCGAGCTGGCGCCGATGTGACCGTCGCTTCTGTGGAGAAGCGGCTTCAAGTTGATGCGTGCCATGGCGTGAAGATTGTTGCGGATGCCCTAATTTCTGACTGCGCTGATACTGGTTTCGATCTCATTTCGCTGCCGGGAGGAATGCCAGGTGCTGCCACTCTCAGAGATTGTGGCATGCTGGAAAGCATGGTAAAGAAGCATGCTGCTGATGGGCAGCTCTATGCTGGAATCTGTGCGGCACCTGCTGTGGCACTTGGATCATGGGGCTTGATGAAAGGTTTGAAGGCAACCTGTTATCCATCATTCATGGAGCAATTGTCTTCCACTGCAACTACAGTTGAATCAAGAGTCCAACAGGATGGCAAAGTTGTGACGAGTCGTGGACCAGGCACTACTATGGAGTTCTCAGTCTCTTTGGTTGAGCAATTATATGGAAAAGAGAAAGCTAATGAAGTTTCTGGGCCACTGGTGATGTGTTCCAATCTTGGGGATAAATTCATCATGGCTGAGCTAAATCCGATTGATTGGAAGTGTGACAATCCTCAGATTCTTGTGCCTATTGCTAATGGCACAGAAGAAATGGAAGCTGTTATAATCATTGATTTTCTGCGTCGAGCAAAGGCAAATGTTGTGGTGGCCTCTGTTGAAGACAAATTAGAAATTGTGGCTTCACGAAAAGTGAAACTAGTGGCAGATGTGCTTCTTGATGAAGCTGTTAAACTTTCATATGACCTAATCGTCTTGCCAGGTGGACTAGGTGGTGCCCAAGCATTTGCCAGCTCAGAAAAACTGGTGAATTTGCTAAAGAATCAGAGGGAGTCAAATAAACCATATGGAGCAATATGTGCATCCCCAGCTCTCGTCCTGGAGCCCCATGGCTTACTCAAGGGCAAGAAGGCCACAGCTTTTCCTGCACTATGTAGCAAGCTGTCCGATCAGAGTGAAATCGAGAACAGGGTTCTGGTTGATGGCAACCTCATTACCAGCAGAGGCCCCGGAACTTCCATGGAGTTTGCACTGGCAATCATTGAGAAGTTCTTTGGCCACGGTAAAGCACTAGAGCTTGCAAAGGTAATGCTTTTCTCAAGCCAGTAA 1290 0.4884 MALRHLTPLSPLSPFTRIPPRRCFTQKPFSLSVSASMGSSSRKVLVPIAHGSEPMEAVIIIDVLRRAGADVTVASVEKRLQVDACHGVKIVADALISDCADTGFDLISLPGGMPGAATLRDCGMLESMVKKHAADGQLYAGICAAPAVALGSWGLMKGLKATCYPSFMEQLSSTATTVESRVQQDGKVVTSRGPGTTMEFSVSLVEQLYGKEKANEVSGPLVMCSNLGDKFIMAELNPIDWKCDNPQILVPIANGTEEMEAVIIIDFLRRAKANVVVASVEDKLEIVASRKVKLVADVLLDEAVKLSYDLIVLPGGLGGAQAFASSEKLVNLLKNQRESNKPYGAICASPALVLEPHGLLKGKKATAFPALCSKLSDQSEIENRVLVDGNLITSRGPGTSMEFALAIIEKFFGHGKALELAKVMLFSSQ* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0144 429 Gene3D - 35 231 IPR029062 -
Vvi19g0144 429 Gene3D - 241 429 IPR029062 -
Vvi19g0144 429 NCBIfam DJ-1 family protein 248 422 IPR006287 -
Vvi19g0144 429 NCBIfam DJ-1 family protein 43 218 IPR006287 -
Vvi19g0144 429 SUPERFAMILY Class I glutamine amidotransferase-like 42 223 IPR029062 -
Vvi19g0144 429 FunFam Protein DJ-1 homolog C 36 226 - -
Vvi19g0144 429 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 42 219 - -
Vvi19g0144 429 Pfam DJ-1/PfpI family 247 409 IPR002818 -
Vvi19g0144 429 Pfam DJ-1/PfpI family 42 207 IPR002818 -
Vvi19g0144 429 CDD GATase1_DJ-1 248 411 - -
Vvi19g0144 429 SUPERFAMILY Class I glutamine amidotransferase-like 247 426 IPR029062 -
Vvi19g0144 429 FunFam Protein DJ-1 homolog C 241 429 - -
Vvi19g0144 429 CDD GATase1_DJ-1 44 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0144 Vvi-Chr19 1617159 1624065 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0144 K03152 - vvi:100253735 830.476