Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0135 ATGGCTTTATCCTCCTCCACTCTCTGTCACCAAAACCTTACAAAACCCTATTTCGTCTCTTTCCACAAACAACCCCATATTCTCTCTCATCTACAATTCCAAACCCCACCCAAAACCCTAACCCTAGACCCCAAATTCACCATCACCGGCGGTTGCAAACTCTCCGGCCATGTCCCAATCAGCGGCTCTAAGAACTCCGCATTATCGATCCTCGCCGCCACTCTTTGCTGCTCCGGCACTTCCAAGCTCCACGGGGTACCAAACCTCTCCGATACTCGAACGATGGCTTCTATTCTTCGGTCATTGGGTGTGGAAATTGAAGCCTGCAATGGCGAAATGTGGGTCAACGCTGACGGGGTTGGGTCCGTACAGCCTTGTCCGGAGGACATTGGGAAGATTCGAGGTGGGTTTTTCGTTATTGGGCCATTGCTGGCTCGGTTCGGAGAGGCAGTGGTGGCTTTGCCCGGTGGGTGTGATATTGGGACTCGCCCAGTTGATTTGTACATTAGAGGGCTGCGTGCCCTCGGCGCCATTGTCGAATTGGGGGATGGGAAAGTGCGAGCACAAGCGGCAAATGGCAGAGGATTGGTTGGAGGGAGGTTCAAACTCGATCACCCCAGTGTTGGAGCAACCGAAACTCTCATGATGGCAGCATGTATGGCTGATGGAGTGACCGTGCTTTCAAATGTTGCTAAAGAACCAGAAGTGATTGATCTTGCTCGTTTTCTGACTGGCAGTGGGGCATGTGTGGAAGGAGCAGGGAGTGATACCCTTTACATAAAGGGAAAAAACCAGTTGCATGGTTCTGAATGTATAGTACCACCTGATCGTATCGAAGCAGGCACTTTCATGCTTGCTGCAGCTATCACTCGCTCGTCCATCTCAATGTCTCCCGTCATTCCTTCCCATGTAGCATGTCTAATAGATAAGCTTTTAGCCGCTGGTTGCAAAATCACATGTGCCCATGATACCTTGGAGGTTTCAGCGGTTCCTGATGATGTTGGTCACAATTTGCAAGGCTTTGATGTTAGGACGTGCCCGTTTCCTGGGTTTCCTACAGATCTTCAACCTCAGACAATGGTGCTGCTGACAACATGCGATGGTTTGAGCATAGTGGAAGAAACCGTGTTTGAAAACCGAATGGGTCATGTAAGAGAGCTGCAAAAGCTGGGAGCCAGAATTCGGGTCTGCGGGAGCACTGCAGTGATTTGTGGCAAGGAGAAAGGAAGTGCATTGCTCAGCTCTCACCTCGTTGCAAAGGATTTAAGAGGCGGCGTGTCACTTGTCTTGGCAGGGTTGGCTGCAGAAGGAGTCACTGAAATCAGTGGCATTGCCCATATAGACCGAGGTTACGAGAATTTAGATGCCAAGCTTCGGTTACTAGGTGCTGATATCAAAAGATTGATTCCCCTCGGTTCTCCGTTGTAG 1428 0.5035 MALSSSTLCHQNLTKPYFVSFHKQPHILSHLQFQTPPKTLTLDPKFTITGGCKLSGHVPISGSKNSALSILAATLCCSGTSKLHGVPNLSDTRTMASILRSLGVEIEACNGEMWVNADGVGSVQPCPEDIGKIRGGFFVIGPLLARFGEAVVALPGGCDIGTRPVDLYIRGLRALGAIVELGDGKVRAQAANGRGLVGGRFKLDHPSVGATETLMMAACMADGVTVLSNVAKEPEVIDLARFLTGSGACVEGAGSDTLYIKGKNQLHGSECIVPPDRIEAGTFMLAAAITRSSISMSPVIPSHVACLIDKLLAAGCKITCAHDTLEVSAVPDDVGHNLQGFDVRTCPFPGFPTDLQPQTMVLLTTCDGLSIVEETVFENRMGHVRELQKLGARIRVCGSTAVICGKEKGSALLSSHLVAKDLRGGVSLVLAGLAAEGVTEISGIAHIDRGYENLDAKLRLLGADIKRLIPLGSPL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0135 475 Hamap UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 43 468 IPR005750 GO:0008760|GO:0019277
Vvi19g0135 475 Gene3D Enolpyruvate transferase domain 46 466 IPR036968 GO:0016765
Vvi19g0135 475 PANTHER UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE 29 468 - -
Vvi19g0135 475 NCBIfam UDP-N-acetylglucosamine 1-carboxyvinyltransferase 45 467 IPR005750 GO:0008760|GO:0019277
Vvi19g0135 475 SUPERFAMILY EPT/RTPC-like 45 467 IPR013792 GO:0003824
Vvi19g0135 475 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 49 457 IPR001986 GO:0016765
Vvi19g0135 475 Gene3D Enolpyruvate transferase domain 63 273 IPR036968 GO:0016765
Vvi19g0135 475 CDD UdpNAET 54 461 IPR005750 GO:0008760|GO:0019277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0135 - - vvi:100262376 948.732