Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0127 ATGATGATTGCTTTGATGATGGAAACATTATTAAAAATATATAGAAAAAAAAGAGAAGTATTGTTAATGCTAATAGTACAATTAAAGGAAGAAAATAATGTGAGGGAGGAAGAAAAAGAGGAGCTAAAGCACTTTCATAGGTCCCATGGCATGTCTCCTCAGCAGCCCCATGATGTGATCTCCATCCTTTTTCCCACAGCAATTCTGCTATCTTCTTCTTCTTTTTCTTCTTCTCCCACCATCTTCTTCTTCATCTTGCTTGGGAATTCATCTGATATGTCAAGCAACAAAGGAAAGGACACAGGAGAAGGGTCGTCGACTCGATCCTCTGCTGAAGATCAGCAGCAGCAACCGCCACCACTGAGTCGGTACGAGTCGCAGAAGCGGCGAGACTGGAACACCTTTGGACAGTTCTTGAAGAATCAAAGACCCCCAGTTGCCCTCGCCCAGTGCAACTCCAACCAAGTACTCGATTTTCTTCGATATCTTGATCAGTTCGGAAAGACTAAGGTGCACCTACAAGGCTGTGTCTATTTTGGGCAACCTGAACCACCTGGTCCTTGTACTTGTCCATTGAAACAAGCTTGGGGCAGCCTTGATGCCCTAATCGGTCGCCTCAGAGCTGCTTATGAAGAAAATGGAGGATTACCTGAGAAAAACCCTTTTGCCAGTGGGGCAATTCGGATTTATTTACGCGAAGTGAGGGACTCCCAAGCCAAGGCGAGGGGTGTCCCGTATAAGAAGAAGAAGAAAAAGAGAAATCAAATGAAGGCGAACAGCGATGAGTCGAACTTTCCGATGCAGTCCATGTGA 813 0.4514 MMIALMMETLLKIYRKKREVLLMLIVQLKEENNVREEEKEELKHFHRSHGMSPQQPHDVISILFPTAILLSSSSFSSSPTIFFFILLGNSSDMSSNKGKDTGEGSSTRSSAEDQQQQPPPLSRYESQKRRDWNTFGQFLKNQRPPVALAQCNSNQVLDFLRYLDQFGKTKVHLQGCVYFGQPEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPEKNPFASGAIRIYLREVRDSQAKARGVPYKKKKKKRNQMKANSDESNFPMQSM* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0127 270 MobiDBLite consensus disorder prediction 94 123 - -
Vvi19g0127 270 MobiDBLite consensus disorder prediction 240 270 - -
Vvi19g0127 270 MobiDBLite consensus disorder prediction 94 127 - -
Vvi19g0127 270 PANTHER PROTEIN G1-LIKE2 97 260 IPR040222 -
Vvi19g0127 270 ProSiteProfiles ALOG domain profile. 123 250 IPR006936 -
Vvi19g0127 270 Pfam ALOG domain 114 236 IPR006936 -
Vvi19g0127 270 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0127 Vvi-Chr19 1428920 1429732 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0127 - - vvi:100257253 433.335