Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0124 ATGCGGTCTCTTCTCTTCTTTCATCTCTTCTTCTTCTTCTCCCTCCTATACCCCCTTTCCTCTACTGCACAACTCTACAAACTCACCACCGGCCTCGGATCAAAGCTTCTCTCACACCCAAAACCCCTCAAAAACCCCTCTCCAACTAGGTTTTTTGAAGTCACCAAACCAGTAAAAGTCCCAAAAACCAAGCCATGTTCATCTCTTGTTCTGCAACATGACTTTGCATCCACATATGGGAAGCCCCCGGTGATTGTCCCCTACTCTCCTCCTTCCCATTGCCCATCGCAGAACTTCTCCAAGATTGTATTGGAATGGACTGCAACCTGTAAAGGAAGGCAGTTTGATAGAATTTTTGGTGTCTGGCTTGACGGGGTTGAGCTTCTCAGGAGCTGTACTGCAGAGCCTAAAGCAACTGGGATTGTTTGGACTGTTGAGAAGGACATAACCAGGTATTCTTCACTGCTCTTGAAGAGCCAGACTAGTCAGACTCAGACTCTTGCTGTCTACATGGGGAATATTGTTGATGAAACCTATACAGGAGTCTACCATGTGAATCTCTCTTTTCATTTTTATCCTGCTGATGATTCCAACCTTCTGAAGTCTGGGTATGGTTCTAGGCCTGATTTGATCTTACCCATCTCTAGAAACCTCCCTCTGAATGATGGGTTGTGGTTTGAAATCCAGAACCAGACTCATGTGGAGGGGAAGGAGTTCATAATCCCAAAGAATGCATATAGGGCTGTGTTGGAGGTTTATGTCTCATTCCATGAGAATGATGAGTTTTGGTACTTGAATCCTCCAAATGATTATATTGATGTGAACAATCTCACTGGTTCTATACCTGGAAATTCTGCCTTCAGGGAGGTTTTGGTGAGTCTTGATGGTGAGCTAGTTGGTGCTGTTTGGCCTTTCACAGTGATCCACACTGGTGGGGTGAATCCCCTCCTTTGGAGGCCAATTTCTGCAATTGGGTCATTCAATCTTCCAAGCTATGATATTGAAATCACTCCATTTTTGGGGAATTTGTTGGATGGGAAGAGCCATGGATTAGGGTTTAGTGTTACAAATGCTTTGAATGTGTGGTTTATAGATGCAAATTTACATCTTTGGTTGGATAACAAAAGCAAGAGGACTCAAGGGAAGCTTTTAGGGCACAACTCGAAGTCTTCTTCCTCAATTTCAACATCGTCTATGGAAGGCTTAAATGCATCATTTTTGATACATTCTACTAGGTCTATATCCTCCCGTGGATGGGTCAAGTCCTCCCATGGGAAGATGACAACAAAGACAACCCAAGATTTCAACTTTATGAACAAGATGGATATCTCAAAAAATGGCAATTTGCAGATCGTGAATCAGAGAATCCAAGTTACAAACGATCTTCATACTACATTGCCTTCTTCTTCAACCTATGTTGTCAAATCTACTAAAACCTTTCCCTTGTACTTATACTATGACATTATCAACCAAGGGAATGGAAGCTTCGTAGCGAAATCAAAAATAAAATTGGGGTTCAATGAGAAGAGGTCTAAGAAGCTTGGATCCACTTCATCGAAAATTGCTTTAAAAAATTTGCAGAAGGGACGAGGTAACATGCATGTTGAAGGTAACTTGGTCACCAATGGAACGGCGGCTACTAGTCAAGTATATGAGTACGTTGATCCTAAAGGTTGCTACTTTAGAAATGTTAGTAGCTCAAATGGCACAATTTTGTATGATGAAGCAAGCAATTCTTGTACCATAAGGAGTTCAAAAGATAAAGGGTCTACGTAG 1776 0.4206 MRSLLFFHLFFFFSLLYPLSSTAQLYKLTTGLGSKLLSHPKPLKNPSPTRFFEVTKPVKVPKTKPCSSLVLQHDFASTYGKPPVIVPYSPPSHCPSQNFSKIVLEWTATCKGRQFDRIFGVWLDGVELLRSCTAEPKATGIVWTVEKDITRYSSLLLKSQTSQTQTLAVYMGNIVDETYTGVYHVNLSFHFYPADDSNLLKSGYGSRPDLILPISRNLPLNDGLWFEIQNQTHVEGKEFIIPKNAYRAVLEVYVSFHENDEFWYLNPPNDYIDVNNLTGSIPGNSAFREVLVSLDGELVGAVWPFTVIHTGGVNPLLWRPISAIGSFNLPSYDIEITPFLGNLLDGKSHGLGFSVTNALNVWFIDANLHLWLDNKSKRTQGKLLGHNSKSSSSISTSSMEGLNASFLIHSTRSISSRGWVKSSHGKMTTKTTQDFNFMNKMDISKNGNLQIVNQRIQVTNDLHTTLPSSSTYVVKSTKTFPLYLYYDIINQGNGSFVAKSKIKLGFNEKRSKKLGSTSSKIALKNLQKGRGNMHVEGNLVTNGTAATSQVYEYVDPKGCYFRNVSSSNGTILYDEASNSCTIRSSKDKGST* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0124 591 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 17 584 IPR021102 -
Vvi19g0124 591 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 59 482 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0124 Vvi-Chr19 1401149 1403986 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0124 - - vvi:100253845 1113.6