Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0123 ATGGCGAGACGAGTCTACACGACCGAGTTGGGTTGCATCGCCTGTAACGAACTCAGTGAACTCGGAGCTGGCAAGGAGGCCTGGCTCGTCGAAAACCCTAGCCTCATCTGCGCCCTGGACACCGATTCTCTAGCTCTCGCCAACCGATCCTTCGTTCTCGTTCTGGGTTGGTCCGAAAATGGCGATCCCTACAATTCTCCTGTCAAGATCCGACCCACTTTGTCACAGATCGAGACCGAGCGGATTACTGCTGTTGAGTGGTTGGTTTTTGATGAGATTAGGGTTCTCGCGGTTGGGACTTCTAGCGGGTATTTGATGATTTATTCGTTGGGTGCTGATTTGATTCATAAGCAGATGATAAATCCTGGACGGATTCTAAAGTTTAGAGTCCGTGGAACTAAGAGAGATCTGACACAGGGTTCATCCTCAGAGGAGGTTTGTGTTGTTATGCCTGGTGTAATTGCTCGTTTTGATGGGGCTGATTTACAGAGTATGCTGCAAAGATGGTTTCAAGATACACACTCTCAGTTTTGGGATGAGAAACCAAAAAGGAGAGATCAAGAGGATTCGGAAAAGTCTTATGGAAGACTGCCTTACCAGCTATGGAATGTTAGCAAGTATGGGCCATGTGCTGATGCAGCAATTACTGGGACAATGCCTCCTCCACTCATGGAACTCCAGTCAAGTCAACGCTATTATTGTGCAGTGACTATTGGAGATGATGCTGTGATTTCTGCATTCAGGCTTTCAGAAGACAGAAATAGGTCTTTAGTGGGAGCTATCTTGTCAAAAGTTGTGCCTGCAACCTTTTCAACAATAGCCTCTTTTTCTAAAATGATATGGAGGAGTGAGCAAAAATCACCAAAAAGATCGGAACCAAAGCCTCAACCATTTGCCCGAGCTTCTCCTTTGACATGTTTGAAAGATCACCCAAGAAAGGGCGAGAAGCTTACTTTATCACCTAGTGGTACATTGGCTGCCATAACAGATTCACTGGGCCGTATATTGCTATTAGATACTCAAGCACTCGTTGTAGTACGGTTATGGAAGGGATATCGTGATGCTAGCTGCCTGTTCACGGAGATGCTAGTCAGCAAAGATACTGCAGCATCAAGTTCCTCTTACTATGAGCCAGTGAAGAGTGATTATTGCCTGTGTTTAGCTATTCACGCCCCACGAAAGGGAATTGTTGAGGTATGGCAGATGAGGACTGGACCACGCCTTCTAACTGTTCAATGCTCCAAAGGCAGTAAAATACTGCAACCCACCTACAGGTTTGGGTCATCAATGGGCTCTCCTTATGTCCCATTGGAAGTTTTCCTGTTGAATGGAGACTCTGGTCAATTATCAGTTCTAAACCGATCTCTTAATTGA 1374 0.4585 MARRVYTTELGCIACNELSELGAGKEAWLVENPSLICALDTDSLALANRSFVLVLGWSENGDPYNSPVKIRPTLSQIETERITAVEWLVFDEIRVLAVGTSSGYLMIYSLGADLIHKQMINPGRILKFRVRGTKRDLTQGSSSEEVCVVMPGVIARFDGADLQSMLQRWFQDTHSQFWDEKPKRRDQEDSEKSYGRLPYQLWNVSKYGPCADAAITGTMPPPLMELQSSQRYYCAVTIGDDAVISAFRLSEDRNRSLVGAILSKVVPATFSTIASFSKMIWRSEQKSPKRSEPKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFTEMLVSKDTAASSSSYYEPVKSDYCLCLAIHAPRKGIVEVWQMRTGPRLLTVQCSKGSKILQPTYRFGSSMGSPYVPLEVFLLNGDSGQLSVLNRSLN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0123 457 PANTHER RAB3-GAP REGULATORY DOMAIN 5 451 IPR026059 GO:0043087
Vvi19g0123 457 MobiDBLite consensus disorder prediction 284 312 - -
Vvi19g0123 457 SUPERFAMILY WD40 repeat-like 66 408 IPR036322 GO:0005515
Vvi19g0123 457 Pfam Rab3 GTPase-activating protein regulatory subunit N-terminus 28 420 IPR032839 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0123 K19937 - vvi:100241866 917.146