Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0116 ATGTGGTTGGGAGTTCATTGTGTGGATGGTAAAGTGCAAATGCTGGATCTGAAAGGCCTTTGGTTGGAGGGAGTACTGGGACCCGAGCTTGGAGAACTTAGTCATCTAAGATCTCTTGTGCTATATAGGAACCACTTCTCAGGCTTCATTCCTAAAGAGATTGGAAGGCTTAAAATGCTGGAATTATTGGATTTAAGAAATAACAACTTGAGCGGAAGAATCCCTGCAGAAATAAGGATGATGCCTTCATTAAAACACCTGTGA 264 0.4205 MWLGVHCVDGKVQMLDLKGLWLEGVLGPELGELSHLRSLVLYRNHFSGFIPKEIGRLKMLELLDLRNNNLSGRIPAEIRMMPSLKHL* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0116 87 Gene3D Ribonuclease Inhibitor 1 86 IPR032675 -
Vvi19g0116 87 PANTHER PROTEIN MALE DISCOVERER 2 2 81 - -
Vvi19g0116 87 Pfam Leucine rich repeat 34 87 IPR001611 GO:0005515
Vvi19g0116 87 SUPERFAMILY L domain-like 2 87 - -
Vvi19g0116 87 FunFam Leucine-rich repeat receptor-like kinase 1 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0116 5 78 Receptor kinase-like Gene Family AT1G60800 48.649 4.82e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0116 - - vvi:100854079 171.785