Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0111 ATGGAGAAAAAAGGAGGTTCAAGGCTGAATATTGCCATAATTCATCCTGATCTTGGAATAGGTGGGGCTGAAAGATTAATTGTTGATGCGGCTGTGGAGCTTGCATCCCATGGACATAAGGTTCATATATTTACAGCACACCATGACAAGAAACGATGTTTTGAGGAAACTCTTTCAGGTACCTTTCCAGTCACAGTATATGGTGCTTTCCTACCCCGGCATATTTTCTACCGACTCCATGCTGTGTGTGCATATCTGCGCTGCATTTTTGTTGCTCTGTGTGTGCTGTTGATGTGGTCATCATTTGATGTTATAGTAGCAGATCAGGTCTCTGTTGTCATTCCTTTGCTAAAACTTAAGAAGAAAACAAAGGTTGTGTTCTATTGTCATTTTCCGGATTTGTTGCTGGCTCAACACACAACTGTCCTTAGGAGGATATATAGGAAACCAATAGACTTTGTAGAAGAAACAACAACTGGAATGGCAGATTTGATCCTTGTGAACAGCAAGTTTACTGCATCAACTTTTGCGAATACATTCAAGCGTCTTGACGCACGAGGAATTCGTCCAGCAGTTCTCTATCCAGCAGTCAATGTGGATCAATTTGATAAACCCCATGCTTTTAAGTTGAATTTTCTCTCCATCAATCGCTTTGAAAGGAAAAAAAACATAGATTTAGCAATTTCAGCTTTTGCCCTGCTTCGCTCTCTTGAAGAGGATGCTCTTGGAGGTCAGAATTTTGCTGATGCATCATTAACTATTGCAGGTGGCTATGACAAACGGCTGAGAGAGAATGTTGAGTACTTAGAAGAACTTGAGAACTTAGCAGACAGGGAAGGGGTGTCTGATCAGGTTAAATTCATCACATCCTGCTCAACAACTGAAAGAAACGAGCTTCTCTCCCAATGCCTATGCGTCCTTTACACACCAAAGGATGAGCACTTCGGCATTGTTCCTTTGGAGGCAATGGCAGCCCACAAACCAGTCATTGGGTGCAACAGTGGGGGGCCAGTCGAGACGATCAAAGATGGGGTGACGGGTTTCCTCTGCAAGCCCATCCCACTAGAGTTTTCTTTGGCCATGGCTAGACTGATTCGCGATCCCGAGATGGCTGTGAGCATGGGTGGAGAAGCGCGGAAGCATGTCAGTGAATCTTTCTCTACCAGGATATTCGGCCAGAGGTTGAACCGGTATGTCATAGATGTTACTGAGAAGAAGAGGGAGTAG 1227 0.4417 MEKKGGSRLNIAIIHPDLGIGGAERLIVDAAVELASHGHKVHIFTAHHDKKRCFEETLSGTFPVTVYGAFLPRHIFYRLHAVCAYLRCIFVALCVLLMWSSFDVIVADQVSVVIPLLKLKKKTKVVFYCHFPDLLLAQHTTVLRRIYRKPIDFVEETTTGMADLILVNSKFTASTFANTFKRLDARGIRPAVLYPAVNVDQFDKPHAFKLNFLSINRFERKKNIDLAISAFALLRSLEEDALGGQNFADASLTIAGGYDKRLRENVEYLEELENLADREGVSDQVKFITSCSTTERNELLSQCLCVLYTPKDEHFGIVPLEAMAAHKPVIGCNSGGPVETIKDGVTGFLCKPIPLEFSLAMARLIRDPEMAVSMGGEARKHVSESFSTRIFGQRLNRYVIDVTEKKRE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0111 408 Coils Coil 258 278 - -
Vvi19g0111 408 Gene3D Glycogen Phosphorylase B; 7 204 - -
Vvi19g0111 408 Pfam Glycosyltransferase Family 4 20 200 IPR028098 -
Vvi19g0111 408 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 6 204 - -
Vvi19g0111 408 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 7 406 IPR027054 GO:0004378|GO:0006486
Vvi19g0111 408 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 205 387 - -
Vvi19g0111 408 Pfam Glycosyl transferases group 1 212 380 IPR001296 GO:0016757
Vvi19g0111 408 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 397 - -
Vvi19g0111 408 CDD GT4_ALG2-like 9 395 - -
Vvi19g0111 408 Gene3D Glycogen Phosphorylase B; 205 386 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0111 1 408 Glycosyltransferase AT1G78800 77.696 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0111 K03843 - vvi:100248737 792.341