Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0104 ATGTCTTGTTCTCCCCCTTCATTCACTCTCTCATTTATCTTCCTATCCTTCATTTCAATTTATTCTTTCACTGTTCATGCTTCTGTTCCGTTAAAGAACACTTTCAAGTATGTCAATGAAGGCGGATTCGGGCCTTATATCGTCGAGTATGGTGGAGACTACCGCGGCCTTCCGATCTTTGCTTCACCCTTCCAATTTTGTTTCTATAACACCACTCCTAATGCCTACACCCTTGCTTTAAGAATGGCTGTTCAGCGGACTGAGCCAATCTATCGTTGGGTGTGGGAGGCCAACCGAGGAAAACCAGTCGGACAGAATGCAACACTAACCTTTGGCACAGATGGAAATCTTGTCTTAACCCATGCAGATGGCCAAGTTGCTTGGCAGACCGGCACAGGCAACAAGGGCGTGGTGGGGCTGAAACTGCTTTCAAATGGGAACTTGATTCTCCATGACTCTACAGGGCAGCAACTCCCCAACCCCAATGCTCTATGCTGTAGGGACCCCTCCCCTTGGGAAACACGTGGCACGCGGCTCATGGTGACGCGTGGCACGTACTGTCAGCCGGACCATCATCATCCGGATTCCCCTACAGATACGTATGGTGCGACTATCCTATCCGGAACCCCCCAAGGAAAGACAAACAACGTTTCAGCTTCTCCTATCCAAGGAAGAGCAAACGACGCTGGCAGAACGTAG 699 0.4993 MSCSPPSFTLSFIFLSFISIYSFTVHASVPLKNTFKYVNEGGFGPYIVEYGGDYRGLPIFASPFQFCFYNTTPNAYTLALRMAVQRTEPIYRWVWEANRGKPVGQNATLTFGTDGNLVLTHADGQVAWQTGTGNKGVVGLKLLSNGNLILHDSTGQQLPNPNALCCRDPSPWETRGTRLMVTRGTYCQPDHHHPDSPTDTYGATILSGTPQGKTNNVSASPIQGRANDAGRT* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0104 232 Pfam D-mannose binding lectin 94 154 IPR001480 -
Vvi19g0104 232 MobiDBLite consensus disorder prediction 202 232 - -
Vvi19g0104 232 ProSiteProfiles Bulb-type lectin domain profile. 45 163 IPR001480 -
Vvi19g0104 232 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 159 IPR036426 -
Vvi19g0104 232 Gene3D - 60 162 IPR036426 -
Vvi19g0104 232 CDD B_lectin 48 156 IPR001480 -
Vvi19g0104 232 SMART blect_4 48 165 IPR001480 -
Vvi19g0104 232 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0104 Vvi-Chr19 1267651 1268519 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0104 - - vvi:100246894 305.834