Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0103 ATGGATGGGAACATCAGATTGTATACGTATTTTGACAAGGTGGATTATCAGGGTTGGCAAGTGACCTACACTCTTTTTGATAGAGATTCAGGTGATGAGACTGAGTGCCAATTGCCAGAGCGATGTGGGAAGTTTGGCCTCTGTGAGGACAGCCAGTGTGTTGCTTGTCCATCACCAAAGGGCCTGATGGGGTGGAGCAAGGACTGTGCACCATTGAAGTTATCTGGCTGTGGGGTGAATGATTTTCACTACTACAAACTTGAAGGGGTCGATCATTTCATGGGCAAGTACAGTGATGGAGATGGACCCATGAAGGAGAAGCAATGTGGGGATAAATGTAGCAAGGACTGTAAGTGTTTGGGCTACTTCTACCACACCCACACATCAAGGTGTTGGATCGCATATGACCTGAAAACCCTATCCAAAGTCCAGAATTCAACGCACTTGGCTTATATAAAGGCACCAAATAAGTACTGA 477 0.4591 MDGNIRLYTYFDKVDYQGWQVTYTLFDRDSGDETECQLPERCGKFGLCEDSQCVACPSPKGLMGWSKDCAPLKLSGCGVNDFHYYKLEGVDHFMGKYSDGDGPMKEKQCGDKCSKDCKCLGYFYHTHTSRCWIAYDLKTLSKVQNSTHLAYIKAPNKY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0103 158 Pfam PAN-like domain 104 133 IPR003609 -
Vvi19g0103 158 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0103 Vvi-Chr19 1257905 1258381 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0103 - - vvi:100246894 355.525