Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0101 ATGAATCCTCCAAAACCCATCTCGCCTTTCAGACTCTCCTCTCTTCTTCGCCTCCAGAATGATCCAAAACTCGCTCTCCAGCTCTTCCAGAACCCTAATCCTGACCCTAAACCCTTTCGCTACACCCACCTCTCCTACGACCTCATCATCACCAAGCTCGGCCGCTCCAGAATGTTCCACGAAATGGAACAAATCCTCTCCCAATTGCGCCGAGAAACTCGATTCTCTCCCAAAGAGATCATCTTCTGCAATGTCATCTCCTTCTATGGACGGGCCCGCTTGCCCGATCGTGCAATCCAGACCTTTGAGTCCATCCCGGAATTTCGCTGTCAGAGAACGGGGACGACATGGACTTTGCTTATGAATGCATTTTGGCCTTTTTCAAGCAGGGAAGACAACCCAGAGGCAGTTTTTGGAGCTAAAGAAGGGCTAAAAATATAA 441 0.4943 MNPPKPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTGTTWTLLMNAFWPFSSREDNPEAVFGAKEGLKI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0101 146 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 13 124 - -
Vvi19g0101 146 Pfam PPR repeat 81 110 IPR002885 -
Vvi19g0101 146 Gene3D Tetratricopeptide repeat domain 8 138 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0101 Vvi-Chr19 1247635 1250651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0101 - - vvi:109121424 236.884