Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0094 ATGTACCAACATTCGATTAGTAATGGAGTAGTAAGTGTTTGTTGCTCTTTGCTCATTGCCACATCTTTGGTTGGCATGGGAGATATAGCAACCAAGGAGTGCTTCCAATGGGTGCTCAGCCACCCCAAGATGATTGGAGCTTCAGAAATCATTTGCAGGTTCATGGATGACATGGCTACCCACAAGTTTGAGCAAAAAAGGGTGCACATTCCTTCAAGTGTTGAACTCTATATGAAGCAATATGGTGTTTCAAAGCAAGAGGCGTATGATGAGTTGAGTAAGCAAGTAGTCAAAGAATGGAAGGATATCAACCAGGAGTGCCTCAAGCCTACACCAGTGCCGATGCCAATCATCACACGTGTTCTAAATGTTACCCGTCTGATGAATATCTTCTACAAGGATGAAGATGAGTTTGGCTATGTTGGAAAACGAATGAAAGATCTCATTGCATCGTTCCTCATAGATCCTGCATCAATGCAAGTGGGGAGATGGTTCTATCTATGTTATGCTATGTGTGCCATTTGA 525 0.4267 MYQHSISNGVVSVCCSLLIATSLVGMGDIATKECFQWVLSHPKMIGASEIICRFMDDMATHKFEQKRVHIPSSVELYMKQYGVSKQEAYDELSKQVVKEWKDINQECLKPTPVPMPIITRVLNVTRLMNIFYKDEDEFGYVGKRMKDLIASFLIDPASMQVGRWFYLCYAMCAI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0094 174 Gene3D Farnesyl Diphosphate Synthase 1 157 IPR008949 -
Vvi19g0094 174 SUPERFAMILY Terpenoid synthases 7 156 IPR008949 -
Vvi19g0094 174 PANTHER OS04G0344100 PROTEIN-RELATED 6 139 - -
Vvi19g0094 174 Pfam Terpene synthase family, metal binding domain 6 102 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0094 Vvi-Chr19 1106690 1108633 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0094 K15803 - vvi:104877552 360.147