Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0093 ATGGATTCAGTTAAGCGATCAGCAGTGACCCCAAGTAAGAGTAGATTGGCCCGCACTTTTGCTAAGGTCCTTCACCTTCGCATGGTCACTGGCGTTGCCCCAGTAGATGGAATTCAGAAAATCAAGGCACCGGAAAGCAGCAAGGATGATCAGGATACCGGTAGTTGGTCTCGGTCTCAGTCTTACGATGACAACGATGAAAAACTCAGGAACACAGCTGAGCTGGAAGCCCATCTTGCACAACTATTTGCTAGCATATCATCTGTTAAATCGGCATATGCCCAGCTACAGTATGCTCAGTCTCCTTATGATTCCAATGGGATTCAATCTGCTGATCAGATTGTGGTTTCTGAGTTGAAGAATTTGTCAGAGTTGAAGCGGTGTTATCTGAAGAAACAGTTTGATCCTTCCCCTGAAAGGACACTGTGTTTGGCCGAAATTCAGGAGCAGAAGAGTCTTTTGAAAACGTATGAAATCATGAGGAAGAAGTTGGAATGTCAGATGAAACTTAAGGATTCTGAAATCACTTTTCTTAGAGAGAAGTTGGAAGACTGCCATAAGCAGAACAAGTCGCTTGAGAAGAGGTTAAATCCAAGTGCGCATTTATCTGTGCTCGACAATCTGCACCTATCGGGCATAAGTCCCAGCCATTTCATCACAGTTCTTCAGCATACGGTTAAATCTATTCGAAGCTTTGTCAGACTGATGATCAATGAGATGGAATCATCAGGCTGGGATATCAATGCAGCTGCCGCAGCTATACAACCAAGTGTAGTCTTTTTGAAAGCCACTCACAGATGCTTGGCCTTTGAGTCGTTTGTTTGCCGAGAAATGTTTGACAGTTTTCACTTCCCAAACTTTTCTCTCCCAAATGAGTCATTGCCAGAGCAAAATCAATGGCAGCGGTTCTTCTTTGAGAGATTCATCAAATTGAAATCCACAAGAGTGAAGGAATATCTTGCCCAGAAGCCAAAGTCAACATTTGGTAAATTCTGCCGTGCCAAGTACCTGAAGCTCGTCCACCCCAAGATGGAATCATCCTTCTTCGGCAACCTCAGCCAGAGAAGCATTGTCAACTCTGGAAAGTTTCCAGACACCCCCTTCTTCACCTCATTCTCAGAAATGGCGAAGCGGGTTTGGCTCCTGCATTGCCTGGCCTTTTCATTCAACCCTGAGGCCAAAATCTTCCAAGTCAACAAGGGCTGCCCCTTCTCTGAAGTCTACATGGAAAGCATTATCGATGAACCATCTCCCGCCCCAGACTGCCCACCGGAAACCCACTCACGAGTGGCATTCACTGTAGTTCCAGGATTCAGGATCGGTAAAACTGTTATACAGTGTCAGGTATATCTCTCCCAATGTTAA 1365 0.4527 MDSVKRSAVTPSKSRLARTFAKVLHLRMVTGVAPVDGIQKIKAPESSKDDQDTGSWSRSQSYDDNDEKLRNTAELEAHLAQLFASISSVKSAYAQLQYAQSPYDSNGIQSADQIVVSELKNLSELKRCYLKKQFDPSPERTLCLAEIQEQKSLLKTYEIMRKKLECQMKLKDSEITFLREKLEDCHKQNKSLEKRLNPSAHLSVLDNLHLSGISPSHFITVLQHTVKSIRSFVRLMINEMESSGWDINAAAAAIQPSVVFLKATHRCLAFESFVCREMFDSFHFPNFSLPNESLPEQNQWQRFFFERFIKLKSTRVKEYLAQKPKSTFGKFCRAKYLKLVHPKMESSFFGNLSQRSIVNSGKFPDTPFFTSFSEMAKRVWLLHCLAFSFNPEAKIFQVNKGCPFSEVYMESIIDEPSPAPDCPPETHSRVAFTVVPGFRIGKTVIQCQVYLSQC* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0093 454 MobiDBLite consensus disorder prediction 40 67 - -
Vvi19g0093 454 Pfam Plant protein of unknown function (DUF641) 71 195 IPR006943 -
Vvi19g0093 454 Coils Coil 147 195 - -
Vvi19g0093 454 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 452 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0093 Vvi-Chr19 1085566 1086930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0093 - - vvi:100255640 911.368