Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0089 ATGGGTTGTGCTGGATCGTCACAGACCAAAGGAGATGGGACTGTAAAGAAGATACGGAAGCCAAAGCCTTGGAAGAATCCTCAACCGCTTACAAAAACTCAGCTCATGCAGATGCGTGATGAATTTTGGGACACAGCTCCTCACTATGGTGGCCAGAAAGAGATCTGGGATGCACTTCGAGCTGCTGCCGAAGCTGATCTAACCCTTGCACAAGCAATTGTGGACAGCGCAGGGGTCATTGTTCAAAGTGCCGATTTGACAATTTGCTATGATGAAAGAGGTGCAAAATATGAACTACCCCATTATGTTTTGAGTGAGCCAACCAACTTGATTCGAGACGGTTGA 345 0.4696 MGCAGSSQTKGDGTVKKIRKPKPWKNPQPLTKTQLMQMRDEFWDTAPHYGGQKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPHYVLSEPTNLIRDG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0089 114 Gene3D - 31 104 IPR038169 -
Vvi19g0089 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Vvi19g0089 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 113 IPR039869 -
Vvi19g0089 114 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0089 Vvi-Chr19 1048715 1053372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0089 - - vvi:100267634 229.95